| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3427 |
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| Symbol | |
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| ID | 4280327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4079745 |
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| End bp | 4080875 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136246 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_752100 |
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| Protein GI | 114564586 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAC AAACAATCAA ATCGAAAGCC GCAGTCGCCT GGGCTGTAGG CGAGCCACTA
TCTATGGAAA TAGTAGATGT AATGCCACCA CAGAAGGGTG AAGTACGCGT CAAGATGATC
GCAACAGGCG TTTGCCATAC CGATGCTTTT ACGCTTTCTG GCGATGATCC AGAAGGTATA
TTCCCTTGTA TTCTAGGCCA CGAAGGTGGC GGGATCGTTG AATCTATCGG TGAAGGTGTC
ACTAGCGTAC AAGTGGGTGA TCACGTTATT CCACTTTACA CGCCTGAATG TGGCGAATGT
AAATTCTGTA AGTCTGGCAA GACTAACCTG TGTCAGAAAA TTCGTGCCAC TCAAGGTAAA
GGGTTAATGC CTGACGGTAC CACTCGCTTC TCTAAAGATG GCGTAGATAT CTTCCATTAT
ATGGGCTGCT CAACGTTTTC TGAATATACC GTGTTGCCTG AAATTTCACT GGCGAAAGTG
AACCCTGCAG CACCACTTGA AGAAGTGTGT TTATTGGGTT GTGGTGTCAC AACCGGTATG
GGCGCAGTAA TGAATACCGC CAAGGTTGAA GAAGGCGCCA CGGTCGCTAT CTTCGGTATG
GGCGGTATCG GTCTATCGGC CGTTATCGGC GCGACAATGG CTAAAGCGTC TCGCATTATC
GTTATCGATA TTAACGAAAG TAAATTTGAG TTAGCCGGTA AACTGGGTGC TACGGACTTT
ATTAACCCGA AAGACTACGA CAAGCCAATT CAAGACGTGA TTGTTGAGTT GACCGACGGC
GGCGTCGATT ACTCGTTTGA GTGTATCGGT AACGTTAATG TGATGCGCTC TGCACTTGAG
TGCTGCCATA AAGGTTGGGG TGAGTCAGTG GTTATTGGTG TTGCGGGTGC AGGCCAAGAG
ATCTCTACCC GTCCATTCCA GTTAGTCACG GGTCGGGTAT GGAAAGGCAG TGCATTTGGT
GGTGTTAAAG GCCGCTCTGA ACTACCAGAA TATGTCGAAC GTTACCTAGC GGGTGAGTTT
AAGTTGAGTG ACTTCATCAC TCACACCATG AGTCTTGAGC AGGTCAATGA TGCGTTTGAT
CTTATGCACG AAGGTAAGAG TATCCGTACT GTTATTCATT TTGATAAGTA A
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| Protein sequence | MTAQTIKSKA AVAWAVGEPL SMEIVDVMPP QKGEVRVKMI ATGVCHTDAF TLSGDDPEGI
FPCILGHEGG GIVESIGEGV TSVQVGDHVI PLYTPECGEC KFCKSGKTNL CQKIRATQGK
GLMPDGTTRF SKDGVDIFHY MGCSTFSEYT VLPEISLAKV NPAAPLEEVC LLGCGVTTGM
GAVMNTAKVE EGATVAIFGM GGIGLSAVIG ATMAKASRII VIDINESKFE LAGKLGATDF
INPKDYDKPI QDVIVELTDG GVDYSFECIG NVNVMRSALE CCHKGWGESV VIGVAGAGQE
ISTRPFQLVT GRVWKGSAFG GVKGRSELPE YVERYLAGEF KLSDFITHTM SLEQVNDAFD
LMHEGKSIRT VIHFDK
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