| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3420 |
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| Symbol | |
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| ID | 4280322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4076084 |
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| End bp | 4076290 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136241 |
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| Product | transcriptional regulator, XRE family protein |
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| Protein accession | YP_752095 |
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| Protein GI | 114564581 |
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| COG category | [K] Transcription |
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| COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGACT TAGCTATCCA ATTTGGAGCA AAATTGCGCG ATAAGCGCAA AACACTAGGC
ATTTCTCAGG ATAAATTGGC ATTACTAGCA GAGATTGACC GCAGTTATGC AGGACGAATC
GAGCGCGGTG AAGTCAATAT CACCCTCGAA AAAGCCTATC AGTTAGCAGA GGTTTTGGGG
TGTGATGTCA GGGAACTGCT GCCTTAG
|
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| Protein sequence | MKDLAIQFGA KLRDKRKTLG ISQDKLALLA EIDRSYAGRI ERGEVNITLE KAYQLAEVLG
CDVRELLP
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