Gene Sfri_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3419 
Symbol 
ID4280321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4075416 
End bp4075952 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID638136240 
Producthypothetical protein 
Protein accessionYP_752094 
Protein GI114564580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.735509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA TTTCAATGAA AATATGCACA AGGTTGCATA CTATTCTCCA GGATGAGAGC 
TTTAACAATT TCCGTGTATC TCAATTACGT GATGCATATT TAGCTATATC TCCTACTAAT 
AAGGATTCTG TAGAGGTTCG CAAGTATGTG TACAGACAAA TTCTGAGACT AGTTAAGAAA 
GGTCTATTGT TAAAAAAAGG AGCGAAAAAC TCTAAAAGAG TTACGTATCA GAAGTCGGAT 
TTGTTTCATG AAGCGAGTTT TATCACTGAA ATAACTGAAA GAAAGGTTAA TAAACCCGAG 
TTGATTAATG CAAGTGCTCG TCTCGCTGTC CAGCAGCTTG AAAAGCGTCT TAAAGAATCT 
GAGGTTGATT TACTCACTAG CATTGGCGAG TCAGAAGAGT ATATGCGGTT GTATCAATCC 
TTCCCTGAGA TGAAAGCGCA CCTTGAATCC CAGTATTTAC AAGCCCGTGA AAACAGCTCG 
AAACTACTCG GCCAAATCAA AGCGATTAAG TCTGTTCTCG CTCATCAGCA AAAGTAA
 
Protein sequence
MSKISMKICT RLHTILQDES FNNFRVSQLR DAYLAISPTN KDSVEVRKYV YRQILRLVKK 
GLLLKKGAKN SKRVTYQKSD LFHEASFITE ITERKVNKPE LINASARLAV QQLEKRLKES 
EVDLLTSIGE SEEYMRLYQS FPEMKAHLES QYLQARENSS KLLGQIKAIK SVLAHQQK