Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3411 |
Symbol | |
ID | 4280313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4060381 |
End bp | 4061154 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638136232 |
Product | Elongator protein 3/MiaB/NifB |
Protein accession | YP_752086 |
Protein GI | 114564572 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACCC AGCCACAAAA ACAGTTTAGA GCACAGAAAC TCGATAAAAT TGAAGATGAT ATTATTACTG CTGCCGCATC TGGTTATCCA TTTAACCGTG TTTTTTTAGC CGATGGTGAT GCGATGACGT TACCGTTTAA TCGTTTAAAA GCGATTTGTG AATTGATTAA TACTCATCTG CCTCATGTCA CTCGGATTAG CAGTTATTGT CTCCCGCGTA ACCTAAGCAA TAAAACGGTT GAGCAATTAG CACAATTACG ACAAATGGGT TTATCTATTT TGTATATTGG CTGTGAAAGC GGTGATGATG AAGTGCTTGG ACGCATTAAA AAAGGCGAAA CGTTTGCCTC ATCTTTAGCT GCGTTACAGA AGATTAGCCA AGCAGGCATA AAATCATCAG TGATGATTCT CATGGGATTA GGTGGTGTGC AGTTATCTCG TCAACATGCG ATAGCCTCTG CTGAATTAAT GAATGCGGCT CAGCCCGATT ATTTATCCAC ACTGGTGGTA ACATTACCGC TGGGAACTGA GCGCATGGAT AATGTTTTTG ATGGTAAGTT TGTATTGCCA GATCAAAGCG GTTTATTGAC AGAAATGCAC ACGCTATTGA GCCATCTGAA GTTGGATAAA ACCATTTTTC GTTCAGATCA TGCTTCGAAC TATTTAGTGC TTAAAGGTAT TTTAGGCAAA GATAAGTCTG CATTAATCAC TCAAATTGAG CAGGCATTAC ACGGAATGAT CCCGTTGCGA CAAGAATGGC ACCGGGGTTT GTAG
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Protein sequence | MYTQPQKQFR AQKLDKIEDD IITAAASGYP FNRVFLADGD AMTLPFNRLK AICELINTHL PHVTRISSYC LPRNLSNKTV EQLAQLRQMG LSILYIGCES GDDEVLGRIK KGETFASSLA ALQKISQAGI KSSVMILMGL GGVQLSRQHA IASAELMNAA QPDYLSTLVV TLPLGTERMD NVFDGKFVLP DQSGLLTEMH TLLSHLKLDK TIFRSDHASN YLVLKGILGK DKSALITQIE QALHGMIPLR QEWHRGL
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