Gene Sfri_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3411 
Symbol 
ID4280313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4060381 
End bp4061154 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content41% 
IMG OID638136232 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_752086 
Protein GI114564572 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACCC AGCCACAAAA ACAGTTTAGA GCACAGAAAC TCGATAAAAT TGAAGATGAT 
ATTATTACTG CTGCCGCATC TGGTTATCCA TTTAACCGTG TTTTTTTAGC CGATGGTGAT
GCGATGACGT TACCGTTTAA TCGTTTAAAA GCGATTTGTG AATTGATTAA TACTCATCTG
CCTCATGTCA CTCGGATTAG CAGTTATTGT CTCCCGCGTA ACCTAAGCAA TAAAACGGTT
GAGCAATTAG CACAATTACG ACAAATGGGT TTATCTATTT TGTATATTGG CTGTGAAAGC
GGTGATGATG AAGTGCTTGG ACGCATTAAA AAAGGCGAAA CGTTTGCCTC ATCTTTAGCT
GCGTTACAGA AGATTAGCCA AGCAGGCATA AAATCATCAG TGATGATTCT CATGGGATTA
GGTGGTGTGC AGTTATCTCG TCAACATGCG ATAGCCTCTG CTGAATTAAT GAATGCGGCT
CAGCCCGATT ATTTATCCAC ACTGGTGGTA ACATTACCGC TGGGAACTGA GCGCATGGAT
AATGTTTTTG ATGGTAAGTT TGTATTGCCA GATCAAAGCG GTTTATTGAC AGAAATGCAC
ACGCTATTGA GCCATCTGAA GTTGGATAAA ACCATTTTTC GTTCAGATCA TGCTTCGAAC
TATTTAGTGC TTAAAGGTAT TTTAGGCAAA GATAAGTCTG CATTAATCAC TCAAATTGAG
CAGGCATTAC ACGGAATGAT CCCGTTGCGA CAAGAATGGC ACCGGGGTTT GTAG
 
Protein sequence
MYTQPQKQFR AQKLDKIEDD IITAAASGYP FNRVFLADGD AMTLPFNRLK AICELINTHL 
PHVTRISSYC LPRNLSNKTV EQLAQLRQMG LSILYIGCES GDDEVLGRIK KGETFASSLA
ALQKISQAGI KSSVMILMGL GGVQLSRQHA IASAELMNAA QPDYLSTLVV TLPLGTERMD
NVFDGKFVLP DQSGLLTEMH TLLSHLKLDK TIFRSDHASN YLVLKGILGK DKSALITQIE
QALHGMIPLR QEWHRGL