| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3401 |
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| Symbol | |
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| ID | 4280303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4050408 |
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| End bp | 4050869 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136222 |
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| Product | hypothetical protein |
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| Protein accession | YP_752076 |
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| Protein GI | 114564562 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCTTT CAAATCCGAT TGCAGTCTGG CTAGTGCTTG GGCTGTTATT GATGATCTCG
GAGATTATCA TTCCGGGTGG TATCGTTATT TTATTAGGTG CGGCTTGCGT TATTGTCGCA
TCAGCACAAG CTGTTGGCAT TATTGATGGC TTGGTACAAA GTCTGACATT ATGGTTTATG
GCTTCAATGG TGTTATTACT GAGTTTTCGT CATGTGACCC AGCGTTTAGT GGGCGGCGAT
TCTCATGTCG ACAATACTGA TGAAGAGGCG GATCTCTATA ATCAAGTCGC TATCGTTAAA
CAAGCCATTG GCCCTGGTCA AAAAACCGGT CGAATTAGCT GTTTGGGTAC TGATTGGACT
GCTTTAGGTG ATGGTACTGT GATAAAAAAA GGCACCAAAG TCAGGATCAT TTGTCGGGAT
AATATAGCTT TTGTTGTTGA ACCGATTATT GATTCTGTAT AG
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| Protein sequence | MELSNPIAVW LVLGLLLMIS EIIIPGGIVI LLGAACVIVA SAQAVGIIDG LVQSLTLWFM
ASMVLLLSFR HVTQRLVGGD SHVDNTDEEA DLYNQVAIVK QAIGPGQKTG RISCLGTDWT
ALGDGTVIKK GTKVRIICRD NIAFVVEPII DSV
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