Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3369 |
Symbol | |
ID | 4280271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4016715 |
End bp | 4017500 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136190 |
Product | hypothetical protein |
Protein accession | YP_752044 |
Protein GI | 114564530 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.512056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTGCAA TTGATTATAT TGCCGACATT GGCAAATATG CACTGAAAAT AGTGTTGGGT TATGGTCGAG CTGGCATTAT GTTATGGCGC GCGATCGTAC ATGTTCCTCG CATTAAAAAA GGCACTCCAT TACTGATTAA ACAGGTTTAT GTGCTGGGTG TCCGTTCGAT GGTCATCATT TTAGTGTCGG GTTTGTTTAT CGGTATGGTA TTGGCTCTAC AGGGATATAA TATTCTGGTT GAGTTTGGTA CTGAAGAAAG TTTAGGGCCT ATGGTGGCGT TAAGCTTGTT ACGTGAACTT GGGCCAGTTG TTGCAGCGTT ATTATTTGCT GGGCGAGCAG GCTCAGCGTT AACCGCCGAA ATTGGTTTAA TGAAATCGAC CGAACAATTG TCGAGTTTAG AAATGATGGC AATAGACCCG CTAAGACAAA TCATTGCGCC GCGCTTTTGG GCGGGTGTGA TTAGTATGCC ATTACTGGCG TTGATGTTTA GCTTAGTGGG TATTTTGGGT GGACATTTAG TCGGTGTTGA ATGGAAAGGC ATCGATAGCG GTGCATTTTG GTCTATTCTT CGTGCGTCAG TTGAATGGCG AGAAGATATA GTTAACTGTT TGATCAAAAG TGTTATTTTT GGTGTGGTGG TGACATGGAT TGCCTTGTAT CGAGGTTACG AAGTCCAACC CAACCCTGAA GGCATCAGTC GCGCAACAAC TTCAACGGTT GTACAGGCTA GTTTAGCGGT TTTAGCACTG GACTTTTTGC TTACGGCAAT CATGTTCGGA AATTAA
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Protein sequence | MGAIDYIADI GKYALKIVLG YGRAGIMLWR AIVHVPRIKK GTPLLIKQVY VLGVRSMVII LVSGLFIGMV LALQGYNILV EFGTEESLGP MVALSLLREL GPVVAALLFA GRAGSALTAE IGLMKSTEQL SSLEMMAIDP LRQIIAPRFW AGVISMPLLA LMFSLVGILG GHLVGVEWKG IDSGAFWSIL RASVEWREDI VNCLIKSVIF GVVVTWIALY RGYEVQPNPE GISRATTSTV VQASLAVLAL DFLLTAIMFG N
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