Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3354 |
Symbol | |
ID | 4280256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4002482 |
End bp | 4003222 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136175 |
Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
Protein accession | YP_752029 |
Protein GI | 114564515 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0824924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC AAGATACCAT TTTTGGCATT CACGCCGTTC AAGCTTTGTT AGATAACAGC CCTGAACGTG TCATTGAACT TTGGCTATTA CAAGGCCGTG ATGACGAACG CTTAACCCCG TTAATTAATC TAGCGTCAAC CTTTGGTACA ACACTACAAC GTGCAGCACG TAAAGTGTTA GATGATAAAG CGGGTAGCTC ACAACACCAA GGTATTGTGG CTCGCGTTAA GGCTGTTAAG CCGTTGACTG AAAAAGATTT AGATGAGTTA CTTGATAAAA CAGCAGTGCC TTTTTTATTG ATTTTAGACG GTGTAACTGA CCCACATAAT CTTGGTGCAT GTTTGCGTAA TGCTGATGCG GCTGGGGTGC ATGCGGTTAT CGTACCAAAA GATAACTCAG TAGGGTTAAC TTCAACCGTA AGCAAAGTTG CTTGTGGCGC AGCAGAAACC ATACCGTTAT TCCAAGTGAC TAACCTTGCT CGTACCATGC GTCACTTGCA AGATAAAGGT GTTTGGATTG TAGGTACTGC AGGCGAAGCC GAAGGTAATG TATACCAAGC AGACCTTAAA GGGCCGCTAG CCATTGCTAT GGGCGCAGAA GATAAAGGTT TGCGTCGTTT ATCGCGCGAA GGTTGTGATT CACTCGTATC AATTCCAATG TCTGGAAGTG TGTCTAGTCT CAACGTGTCT GTTGCCACTG GTGTTTGCTT ATTTGAAGCG GTTAGACAGC GTTTAGGTTA A
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Protein sequence | MKKQDTIFGI HAVQALLDNS PERVIELWLL QGRDDERLTP LINLASTFGT TLQRAARKVL DDKAGSSQHQ GIVARVKAVK PLTEKDLDEL LDKTAVPFLL ILDGVTDPHN LGACLRNADA AGVHAVIVPK DNSVGLTSTV SKVACGAAET IPLFQVTNLA RTMRHLQDKG VWIVGTAGEA EGNVYQADLK GPLAIAMGAE DKGLRRLSRE GCDSLVSIPM SGSVSSLNVS VATGVCLFEA VRQRLG
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