| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3353 |
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| Symbol | |
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| ID | 4280255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4000854 |
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| End bp | 4002278 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136174 |
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| Product | major facilitator transporter |
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| Protein accession | YP_752028 |
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| Protein GI | 114564514 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00730717 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGCC CGCTACGCAG TTTTGCATCC TTATATAGCA CCACCTTTTT AATGGTACTT
GCAGCAGGTT TACTAACAAC CTACTTGGGC TTAAGCCTAA CTACTATGCA AGTGCCACAA
ATATGGATTG GTGGCATGAT GTCTGCCTAC TATATTGGTC TTGTGTGCGG TTCCAAAGTT
GGCCATAAAC TTATCGCTCA AGTGGGCCAT ATTCGAGCTT TTGTTGCTTG TGCTGGCATC
GTCACAGCAT CTGCACTGGG TCACGCCTTA ATCGACAACT TAACCATATG GTTAGTATTG
CGCCTTGCCG TTGGTATGGG AATGATGTGC CAATATATGG TGTTAGAAAG CTGGCTCAAT
GAGCAAGCCG AAAATAGTCA ACGTGGCACC GTGTTTGCTA GTTACATGAT TGTATCTTAC
TTAGGGTTAA TGGCTGGCCA GGGAGCCATT AGCTTATATC CCGATTTAGG CATAGAACCA
CTGCTGTTAA TCGCCATATG CTTTGCATTA TGCATTGTGC CTATTTCAAT CACTCGCAGA
ATTCACCCAG AACCGTTGAC TCCGGCGCCA TTACAAATGG GTCTGTATTG GAAACGCGCA
CCTCAAGCCT TAACGACAAT AGCGTTAGGA AGCATGATTG TTGGTTGTTT TTATGGTTTA
GCGCCATCTT ATGCCACAGC CAAAGGCATT GACCCTGAAC ATGTTGCACT CTACATGTCT
TGTACCATTT TTGCTGGGCT GTTAGCTCAA TGGCCAATGG GTAAATTATC TGACATTATT
TCTCGCAGCT TATTAATTCG CATTAACTGC ACATTATTGG GCGTTATCGT ATTAATTATT
ACGGTCGTTC CATTCCACTC TGTGTATTCA TTAATATTAA CCAGTTTATT TGGTATTTTG
GCGTTCACCT TATACCCATT AGCAACGGCC TTAGCGAACT CGCGGGTAGA TCAACACGAA
CGAGTAGGAC TGTCGGCTAC CATATTAGTG ACCTTTGGTA TTGGAGCAAG TATTGGCCCC
TTAGTCGCTT CTGGTTTAAT GCAGGTCTTG GGTGACCAAA TGCTATATGG ATTTATGGCA
ATCTGTTCGT TTACCTTATT AGTAAGACTA CTGTGGATTA ATTTGCGCCA AAAAGCCGAG
CAAACAGCCA CTGGAGATTA CATTATGGCC GGTGGTGATT TAGTCAGCTC ACCGTTAGCA
GCATCATTCG ATCCACGTGT GGATATTGAA ATGGTCAACG AGCAAATGAT CAATCCTTCC
GAGGATGCAT TTGATAGCGT GCCAGATCCA ACCGACGATG AGCTTGAAGA TGCCGATGAG
CAAGCAGGTT ATAATACTGC TTATGCTAGC GTAGTAAACG ATGACAGTTT GGGGCATGAA
GAATTGGATG ACGAAGATGT CGATAATGAG ATCGGTAGAC GTTAA
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| Protein sequence | MDSPLRSFAS LYSTTFLMVL AAGLLTTYLG LSLTTMQVPQ IWIGGMMSAY YIGLVCGSKV
GHKLIAQVGH IRAFVACAGI VTASALGHAL IDNLTIWLVL RLAVGMGMMC QYMVLESWLN
EQAENSQRGT VFASYMIVSY LGLMAGQGAI SLYPDLGIEP LLLIAICFAL CIVPISITRR
IHPEPLTPAP LQMGLYWKRA PQALTTIALG SMIVGCFYGL APSYATAKGI DPEHVALYMS
CTIFAGLLAQ WPMGKLSDII SRSLLIRINC TLLGVIVLII TVVPFHSVYS LILTSLFGIL
AFTLYPLATA LANSRVDQHE RVGLSATILV TFGIGASIGP LVASGLMQVL GDQMLYGFMA
ICSFTLLVRL LWINLRQKAE QTATGDYIMA GGDLVSSPLA ASFDPRVDIE MVNEQMINPS
EDAFDSVPDP TDDELEDADE QAGYNTAYAS VVNDDSLGHE ELDDEDVDNE IGRR
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