| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3346 |
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| Symbol | |
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| ID | 4280248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3993816 |
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| End bp | 3995222 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136167 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_752021 |
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| Protein GI | 114564507 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0700986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAGC AAGGTGCTTT TAAAGCAAGA AACAGGCAAA AAGATGTAGA AGTTAATGCA
TTAAAGTTGC CGCCACATTC GATTGAAGCA GAACAATCCG TTTTAGGTGG ATTGATGCTA
GATGCTGAAG CGTGGGATCG TGTTTCTGAA GCGGTTGTGC CAGAAGATTT TTATTCTCGT
TCTCATCGAA TGATTTTCAC GGCTATGCAA CGTTTAATGG AATCGGGCCA ACCGCTGGAT
TTAATTACCG TATCCGAACA GCTCGAAATT GAAGATCAAT TAGACGATGC CGGCGGCTTT
GCTTACTTAG GCGAAATTGC CAAAAATACC CCTAGTGCCG GTAATATTTT ATCTTACGCA
GACATTGTGC GAGAACGTGC CGTAGTACGT GACATGATTG CCGTTGCCCA CGAAATTGCT
GATGCGGGTT ATAACCCAGA AGGCCGTGAT TCAAGTGCAT TATTAGATTT GGCTGAAACC
AAAGTCTTTA AAATCGCAGA AATGCGTACC AATGCTAATG AAGGCCCGGA AAACATTAAA
AGCATTCTTG AAAAAACCGT TGATAGGATT GAGCAACTTT ATAACAATCC TCATAACGGT
GTTACAGGTG TTTCAAGTGG TTTTAATGAT TTAGATAAAA TGACCGCAGG CTTTCAGTCT
GGCGACTTAA TTATTGTTGC CGCGCGTCCT TCTATGGGGA AAACCACCTT CGCGATGAAC
TTGTGTGAAC AAGCCGCCAT GAATGAAGAC AAGCCAGTGC TTATTTTCAG TCTCGAGATG
CCGTCAGAAC AGATTATGAT GCGTATGTTG GCCTCACTTG GCCGAGTAGA CCAAACCAAA
ATTCGTACTG GTCAGCTAGA CGATGAAGAT TGGGCGCGTG TGTCTTCAAC CATGGGTATT
ATGCTTGAAC AAGGTAAAAT GTACATCGAT GATGGCTCAG GGTTAACCCC AACCGAAGTG
CGTAGTCGTG CCAGACGTAT TGCGCGTGAG CATGGCGGGT TATCAATGAT CATGATCGAT
TATCTGCAAT TAATGCAAGT GCCGTCGTTA AAAGATAATC GTACCTTAGA AATTTCAGAA
ATCTCTCGTT CATTAAAAGC CTTAGCCAAA GAATTAGAAG TACCTGTTAT TGCACTGTCA
CAGCTTAACC GCTCGCTAGA GCAGCGAGCC GATAAACGCC CAATTAACTC TGACTTGCGT
GAATCGGGTG CGATTGAGCA GGATGCCGAT TTGATTATGT TCATTTATCG CGACGAAGTG
TATAACGACA GCTCTGAAGA TAAAGGCACC GCAGAAATCA TCATTGGTAA ACAGCGTAAC
GGACCTATTG GACGTATTCG CTTGGTATTC CAAGGTCAAT TCTCTCGCTT TGATAATTAT
GCTGGGCCGC AATTTGAAGA AGATTAA
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| Protein sequence | MSQQGAFKAR NRQKDVEVNA LKLPPHSIEA EQSVLGGLML DAEAWDRVSE AVVPEDFYSR
SHRMIFTAMQ RLMESGQPLD LITVSEQLEI EDQLDDAGGF AYLGEIAKNT PSAGNILSYA
DIVRERAVVR DMIAVAHEIA DAGYNPEGRD SSALLDLAET KVFKIAEMRT NANEGPENIK
SILEKTVDRI EQLYNNPHNG VTGVSSGFND LDKMTAGFQS GDLIIVAARP SMGKTTFAMN
LCEQAAMNED KPVLIFSLEM PSEQIMMRML ASLGRVDQTK IRTGQLDDED WARVSSTMGI
MLEQGKMYID DGSGLTPTEV RSRARRIARE HGGLSMIMID YLQLMQVPSL KDNRTLEISE
ISRSLKALAK ELEVPVIALS QLNRSLEQRA DKRPINSDLR ESGAIEQDAD LIMFIYRDEV
YNDSSEDKGT AEIIIGKQRN GPIGRIRLVF QGQFSRFDNY AGPQFEED
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