Gene Sfri_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3333 
Symbol 
ID4280235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3982797 
End bp3983531 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID638136154 
Producthypothetical protein 
Protein accessionYP_752008 
Protein GI114564494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0150205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CTCTTCTTGC CACAGCTGTA GTGGGCCTTT TAAGTGTGTC ATCGGCTCAT 
GCGGCAACTG TATTGGGTTT TAAAGTAGGC GCTGATTATT GGCAGGCAGA CACCACAAAT
GCATTTAATG ATGATAGTGG TGTTGCTCAC AGCTTTAATG ATGATTCTTC ACAGGGTAGC
TTGTGGATTG CTGTTGAGCA TCCATTGCCG TTTGTGCCTA ATGTTAAAAT TCGTGAAAAC
CGTCTTGAGT CGAGCACGAG TCTTGCTAAT GCCGACTTTA ACTTTAACGG TCACAATTTT
ACTGGCGCAA CATCGGTGAC GAATGACTTA AGCAATACTG ACTTTGTATT GTATTACGAA
ATTCTTGATA ACGATTTAGT GTCAGTTGAT TTAGGTGCGG CATACAAGTT AATGAGTGGC
TCATTACGTG TTGCTGATGC GGGTCACCCA GAAGAAGTGG ATATCGATAG TGGTATCGTG
ATGGGATACG CCAGTGCACA AGTTGGCATG ATTGGCTTAG GCTTGTTTGG CTTTGCTGAT
GTGATGCTAG GCATCGATGA ATCTAATGTA TATGATTACG GTGCAGGTTT AGGATGGCAG
TTTGACGGAT TAGCTGTCGA TACTTCTATC CGTGTTGGTT ACCGCGAGTT TAATTTTGAT
GTAAGCAACT TCTCTGGTGT TTCTCAAAAT ACTGACTTTA GTGGTGCATT TGCTGGTGTT
GAATTAGTTT TCTAA
 
Protein sequence
MKKTLLATAV VGLLSVSSAH AATVLGFKVG ADYWQADTTN AFNDDSGVAH SFNDDSSQGS 
LWIAVEHPLP FVPNVKIREN RLESSTSLAN ADFNFNGHNF TGATSVTNDL SNTDFVLYYE
ILDNDLVSVD LGAAYKLMSG SLRVADAGHP EEVDIDSGIV MGYASAQVGM IGLGLFGFAD
VMLGIDESNV YDYGAGLGWQ FDGLAVDTSI RVGYREFNFD VSNFSGVSQN TDFSGAFAGV
ELVF