| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3309 |
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| Symbol | |
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| ID | 4280211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3954390 |
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| End bp | 3955550 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136127 |
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| Product | HflK protein |
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| Protein accession | YP_751984 |
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| Protein GI | 114564470 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGGA ATGAGCCCGG TAACAAGGGA AACAAAGACC CTTGGGGAAA TAAAGGTGGT
AACGATAAAG GGCCACCAGA TCTTGACGAA GTATTTCGTA ACCTATCAAA ACGCTTTGGT
GGCAAGGGGG GCGGTAGCGC CACTGGTCAG CCATTTAATT CATCTTTACT GATTGTAATT
GCCTTGATTG CCTTAGTTAT TTGGGCATTG TCTGGCTTAT ATACGGTCAA AGAAGCTGAG
CGTGGAGTGT TACTCCGTTT TGGTCAACAC ATCGGTGAAG TGAGTTCCGG TTTACATTGG
AAAGCCACTT TTATTGACGA AGTGACAATG GTTGATGTGG AAACGTTCCG TTCGATTCCT
GCGTCTGGCA GAATGCTGAC ATCTGATGAA AACATCGTGA ATGTTGAACT TGTGGTTCAA
TACAGCGTAT CAGATGCTTA TTCATATCTG TACAGTGCTG TTGATGCCAA TTCGAGTTTA
CGTGAAGCGA CAGATAGTGC GTTACGTTAT GTCATTGGTC ATAATCGTAT GGATGACATT
TTAACCACTG GTCGTGATGC TATTCGTCGT GACACTTGGA CTGAGTTAGA GCGTATTATT
GAACCGTATA AACTAGGCTT ACAAATTCGT GACGTTAACT TTTTACCAGC TCGTCCTCCT
GAAGAAGTCA AAGATGCATT TGATGATGCA ATCTCTGCTC AGGAAGATGA ACAGCGTTTT
ATTCGCGAAG CTGAAGCTTA TGCTCGTGAA ATCGAACCTA AAGCGCGTGG TACTGTCGAA
CGTATGGCAC AACAAGCTAG TGCTTACAAA GAGCGTGAAG TTCTTGAAGC TAGAGGTAAA
GTCGCTCGAT TTGAGAAGTT ATTACCTGAG TATAAAGCTG CTCCAGGTGT AACCCGAAAT
CGTTTATACA TTGATGCGAT GCAATCTGTG TTGGCTGATA CTAATAAAGT ACTTATCGAC
ACTAAGAATA GCGGCAATCT GATGTATTTA CCTTTGGATA AGTTGATGGA TTCTTCTAAG
AGTCTGCGCA ATCAAGTAGA ACCTGAGGTC GAACGTCACA TCAATTCTGT TTCTAGTAGT
GGTGTTGATA CGCCGATTAC TAGCATGCCG ACTGATGGTC GTCTCAGCCG CGAAGATCGT
ATTCGCCAAG GGAGGAACTA A
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| Protein sequence | MAWNEPGNKG NKDPWGNKGG NDKGPPDLDE VFRNLSKRFG GKGGGSATGQ PFNSSLLIVI
ALIALVIWAL SGLYTVKEAE RGVLLRFGQH IGEVSSGLHW KATFIDEVTM VDVETFRSIP
ASGRMLTSDE NIVNVELVVQ YSVSDAYSYL YSAVDANSSL REATDSALRY VIGHNRMDDI
LTTGRDAIRR DTWTELERII EPYKLGLQIR DVNFLPARPP EEVKDAFDDA ISAQEDEQRF
IREAEAYARE IEPKARGTVE RMAQQASAYK EREVLEARGK VARFEKLLPE YKAAPGVTRN
RLYIDAMQSV LADTNKVLID TKNSGNLMYL PLDKLMDSSK SLRNQVEPEV ERHINSVSSS
GVDTPITSMP TDGRLSREDR IRQGRN
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