| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3276 |
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| Symbol | |
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| ID | 4280178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3921337 |
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| End bp | 3921780 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136094 |
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| Product | transcriptional regulators, TraR/DksA family protein |
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| Protein accession | YP_751951 |
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| Protein GI | 114564437 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000078623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCAAG GCACGAAAAA ACTTGGCGTA CTCGCTATCG CTGGAGTAGA TCCTTACCAG
GAATCGGCTG GTGAAGAGTA TATGAATACC AAGCAACGTG GTCACTTTAC ATTGATCCTC
GAAGCATGGC GTAACCAATT GCGTGAAGAA GTCGACCGTA CGTTAACTCA CATGCAAGAT
GAAGCTGCAA ACTTTCCTGA TCCTGTCGAC CGTGCAGCAC AAGAAGAAGA ATTCAGCTTA
GAATTACGCG CTCGTGACAG AGAACGTAAA TTGATCAAAA AGATTGAAAA GACTTTACAG
TTGATCAAAG AAGATGATTT TGGTTTCTGC TTCTCATGTG GTGTAGAAAT TGGTATCCGT
CGACTTGAAG CTCGCCCTAC AGCCGATCAA TGTATCGATT GTAAAACGTT AGCTGAAATA
AAAGAAAAAC AAATGGCGGG TTAA
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| Protein sequence | MPQGTKKLGV LAIAGVDPYQ ESAGEEYMNT KQRGHFTLIL EAWRNQLREE VDRTLTHMQD
EAANFPDPVD RAAQEEEFSL ELRARDRERK LIKKIEKTLQ LIKEDDFGFC FSCGVEIGIR
RLEARPTADQ CIDCKTLAEI KEKQMAG
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