Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3238 |
Symbol | |
ID | 4280140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3875779 |
End bp | 3876531 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638136056 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_751913 |
Protein GI | 114564399 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000161464 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTA TTTACAAATT ATCGTTAGTT GCATTAGCCG TTGTTGGCCT TACTGCGTGT AATCAAGAAC AAGACGTTGC TCAAAAGAAA GTTGAATTAA CAACTGACGT TCAAAAAGAA GCATATAGTG TTGGTGGTTC AATTGGTAAG TACATGTCTG GCCACATTAA AGAGCAAGAA GAATTAGGCT TTGCTGTTGA CCGCGCTATG GTGATTAAAG GCTTTAGCGA TGGCTTAGGC GAAGAAATGC AGTTAACTGA AGAAGAAATG CAGACTGTAT TACAAAACCT AGATAAAAAA CTAAACGATA AGCGTTTAGA GCAAGCTGAA ACTTTAGCTG CTAAATCAAT TGCAGATGGC AAAAAATTCT TAGAAGACAA TAAAGCCAAA GAAGGCGTAA CCACGACTGA GTCTGGTTTA CAGTATGAAG TATTAGAAGC TGGTAGTGGT GACAAGCCTG CCGCAGAAGA TACTGTTGAA GTTCATTACC GTGGCACGTT AACTGATGGC ACTGAATTTG ACAGTTCATA CGCACGTGGT GAAACCGCTA AGTTTCCACT TAACCGTGTT ATTCCTGGTT GGACTGAAGG CGTACAGTTA ATGCCTGTGG GCGCTAAGTA TAAGTTTGTT ATCCCATCAG AATTAGCCTA TGGCGAACGT GATACTGGCA CTATTCCTGC TAACTCAACA TTGGTTTTTG AAGTTGAATT GATTTCAGTA GAGAAAACGC CTGCAGCAGT AGAAACCAAG TAA
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Protein sequence | MKSIYKLSLV ALAVVGLTAC NQEQDVAQKK VELTTDVQKE AYSVGGSIGK YMSGHIKEQE ELGFAVDRAM VIKGFSDGLG EEMQLTEEEM QTVLQNLDKK LNDKRLEQAE TLAAKSIADG KKFLEDNKAK EGVTTTESGL QYEVLEAGSG DKPAAEDTVE VHYRGTLTDG TEFDSSYARG ETAKFPLNRV IPGWTEGVQL MPVGAKYKFV IPSELAYGER DTGTIPANST LVFEVELISV EKTPAAVETK
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