| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3237 |
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| Symbol | |
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| ID | 4280139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3874622 |
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| End bp | 3875482 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136055 |
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| Product | AzlC family protein |
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| Protein accession | YP_751912 |
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| Protein GI | 114564398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
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| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000344272 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCAA CCGAATCTAT CAGTGTGACT ACCACTAAAA CCAAATCATT TTTAGCGGGC
GGGCTTGCCG TTATGCCGCT AACAATAGCA GTCATCCCTT GGGGGATTTT AGCAGGCTCG
TTCGCCCTTG AAGTTGGCCT TACAGCCGTT GAAAGCCAAG CGATGTCGGC CATTATCTTT
GCTGGCAGCG CCCAGTTAGT TGCGCTCGGC ATGATAAAAG CTGGTATTGG TATCGGCAGT
ATTCTGATAA CTACCTTACT AATTACTTCA AGGCATTTAT TGTATGCCAT GGCCATGCGT
ACTCATATTA GCCCGTTGCC GCTAAAATGG CGTTTAGGGC TGGGTTTTTT ACTCACAGAT
GAACTCTTTG CTATTGCTAA TCAAGCTCAC CATGGCGATA AACCAATCCA ACACCAGTTT
GATCGCTGGT ACGCTTTGGG TGGTGGGCTA ACTTTTTATA TCGGCTGGAA TATTGCCACC
TTACTCGGCA TTGTTGCAGG GCAGTCTATC GATAATTTAG GCGAACTTGG GCTCGACTTT
GCCATCGCCG CCACATTTAT CGCCTTAGTA GTACCGACAG TAAAAAAGCC GTCAATATTA
GTCTGCGTTT TAGTGTCGCT TACGTTAGCA GTGGTGTGCG CAGTGTTCGC GATCCAAGCA
GGGCTGTTAA TTGCGGCAAT ATCGGGTATG GCAGCAGGCA TGGGCTACGC TAAATTTACC
AATGAGGACA GTAAGGTATC AGCCGCCTCT AATTCAAAGA ATGATCATTC AGACAGTGCT
AGTTCAGAAC ACGCTCATTC GGTTACAGCG CATTCAGATA CTTCGCGTTC GGTAGCCGCG
CATAAGGATA AAAACGTATG A
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| Protein sequence | MSATESISVT TTKTKSFLAG GLAVMPLTIA VIPWGILAGS FALEVGLTAV ESQAMSAIIF
AGSAQLVALG MIKAGIGIGS ILITTLLITS RHLLYAMAMR THISPLPLKW RLGLGFLLTD
ELFAIANQAH HGDKPIQHQF DRWYALGGGL TFYIGWNIAT LLGIVAGQSI DNLGELGLDF
AIAATFIALV VPTVKKPSIL VCVLVSLTLA VVCAVFAIQA GLLIAAISGM AAGMGYAKFT
NEDSKVSAAS NSKNDHSDSA SSEHAHSVTA HSDTSRSVAA HKDKNV
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