| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3235 |
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| Symbol | |
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| ID | 4280137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3872786 |
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| End bp | 3874225 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136053 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_751910 |
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| Protein GI | 114564396 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.157661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTAC ACATTTTAGG TATTTGTGGC ACTTTTATGG GCGGTTTAGC CCTACTTGCC
CGCGCAATGG GCCATAAGGT GACCGGCAGT GATGCCAACG TTTATCCACC GATGAGCACC
CAGCTTGAGC AACAAGGTAT CGAGTTAATC CAAGGTTTTG ATCCAGCTCA ATTAGGTAAA
GAAGGCGACA ATCAACCAGA CTTAGTGGTT ATTGGTAACG CCATGAGTCG TGGTAACCCG
TGTGTAGAAG CGGTACTAAA TCGCGGCATA AAATATACAT CTGGGCCGCA GTTTTTATCT
GAACATATTT TACAAGACCG TTGGGTATTG GCTGTAGCGG GTACACACGG TAAAACTTCT
ACTTCCAGCA TGCTAGCGTG GGTTTTAGAA TACTGTGGTT ACGAGCCAGG TTTTTTAATT
GGCGGTGTAC CGCAAAATTT TGGCGTGTCA GCTCGTTTAG GTAACTCAGT ATTTTTTGTA
GTAGAAGCCG ACGAATACGA CAGTGCCTTT TTTGATAAAC GTTCTAAGTT TGTTCATTAC
CATCCTCGCA CCTTAGTGAT CAATAATCTT GAATTTGATC ATGCCGATAT ATTTGCCGAC
TTAGCGGCGA TCCAACGCCA GTTTAATCAC GTTATTCGTA CTGTGCCGGG AGAGGGCAAG
GTGATTTGGC CTAGCGACGT TGAAGCCGTG CAACAAGTGA TTGATATGGG CTGTTGGAGC
GAGCAAGAAA TCTATTCTAA AGCCACAAGC TTAACCACTG GTTTAGCCGA GCATTCTGTT
AATGTTTCAG CGAACCAAGG TGAACCCAAT GCTTGGCAGC CGCGTACTAT TGCAGACGAT
GGTCATGAGT TTGAAGTACT GTTTAAGGGC GAGTCGCAAG GGATAGTAAA CTGGTCATTA
ATAGGTCAAC ATAATATTGA AAACGCCATA ATGGCAATAG CGGCTGCTCG TCATGTGGGC
GTAGCGCCAA GTCATGCTAT TGAGGCGTTA GCACAATTTA GTCCACCAAA GCGTCGTTTA
GAGCTATTAG CGACCGTAAA TGGCGTGTCT GTGTATGACG ATTTTGCTCA TCATCCCACC
GCTATTGCCA CTACTTTACA AGGCTTACGA GCTAAAGTAG CTTCCAGCGA CAATGCTAAT
GGCAACATTA TTGTGGTGTT AGAGCCCCGC TCAAACACCA TGAAAAGCGG AGTACATAAA
GATACTCTTG CCAACTCGAT GGTATTAGCC GATGTGGGCT ACTTATATCA AGCAGACAAT
ATTGACTGGG ACATCAAAGC CAGTATGGCT AATGCGCCAA TCCCTGTGAC TGTGTTTAAC
AACATTGAAG ATATTATTAA TGCAGTTGCC GCTACCGCAA ATCAAGGTGA TACCGTAGTT
ATCATGAGTA ATGGTGGTTT TAATGGTATT CACCAAAAAA TGATTAAAGC TTTAGCGTAA
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| Protein sequence | MHVHILGICG TFMGGLALLA RAMGHKVTGS DANVYPPMST QLEQQGIELI QGFDPAQLGK
EGDNQPDLVV IGNAMSRGNP CVEAVLNRGI KYTSGPQFLS EHILQDRWVL AVAGTHGKTS
TSSMLAWVLE YCGYEPGFLI GGVPQNFGVS ARLGNSVFFV VEADEYDSAF FDKRSKFVHY
HPRTLVINNL EFDHADIFAD LAAIQRQFNH VIRTVPGEGK VIWPSDVEAV QQVIDMGCWS
EQEIYSKATS LTTGLAEHSV NVSANQGEPN AWQPRTIADD GHEFEVLFKG ESQGIVNWSL
IGQHNIENAI MAIAAARHVG VAPSHAIEAL AQFSPPKRRL ELLATVNGVS VYDDFAHHPT
AIATTLQGLR AKVASSDNAN GNIIVVLEPR SNTMKSGVHK DTLANSMVLA DVGYLYQADN
IDWDIKASMA NAPIPVTVFN NIEDIINAVA ATANQGDTVV IMSNGGFNGI HQKMIKALA
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