Gene Sfri_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3233 
Symbol 
ID4280135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3871562 
End bp3872092 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content41% 
IMG OID638136051 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_751908 
Protein GI114564394 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.159861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACA CCATTGAAAT GATGATTTCT GAACAAGAAA TCAATAAAAC CCTAGACCAA 
TTAGCTGAAC GTATTAATGC CCATTATGCC GACAGTGAAC GCTTATTAAT GGTTGGCCTT 
TTAAAAGGTT CAGTAGTGTT TATGGCCGAT TTGTGTCGCC GTATTAAAGG CCATGTTGAA 
ATCGATTTTA TGTCAGTATC GAGCTACGGT AATACCATGA ACAGCTCGCG TGATGTGAAA 
GTGCTTAAAG ATGTACAGTC TGACATCGCC GGTCGTGACG TATTAATCGT TGAAGACTTA 
ATCGACTCAG GTAACACCTT AAACAAAGTG CGCGAGATGT TATTGCTGCG TGAGCCAAAA 
AGCCTAGCGC TTTGTACGTT ATTAGATAAA CCTGAACGCC GTGAAGTAGA CGTTTATGTC 
GACTTTATTG GTATAACCAT CCCAGACGAG TTTATTGTGG GTTATGGTAT CGACTACGCA 
GAGCAGTATC GCAACTTGCC TTACATCGCT AAAGTAGTGC CATTAGATTA A
 
Protein sequence
MKHTIEMMIS EQEINKTLDQ LAERINAHYA DSERLLMVGL LKGSVVFMAD LCRRIKGHVE 
IDFMSVSSYG NTMNSSRDVK VLKDVQSDIA GRDVLIVEDL IDSGNTLNKV REMLLLREPK 
SLALCTLLDK PERREVDVYV DFIGITIPDE FIVGYGIDYA EQYRNLPYIA KVVPLD