Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3213 |
Symbol | |
ID | 4280115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3847254 |
End bp | 3849044 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136031 |
Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
Protein accession | YP_751888 |
Protein GI | 114564374 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGT CGTTAGAAAA GTCATTAGCC AAATGGCTTA AAAGCCAACA ATCTTCTTGT GGTATTTTCC TCAAACTATC GGTGTTATGT GGTGTGCTCA ATGGCATCGC CATCGTGGCG CAGGCCTATT TTATTGCCCA GATTTTACAG GGTGTCATTA TTGATAACCT TGTTCCCGCA GCATTAAGCC TTCAATTTTT TGCCCTTATT GGTTTGTTAT TTGTCCGAGC CTTATTGGCG CAAGTACGTG AACGGATAAG CTTTGAGGCG GGCAAACGTT TACGCACCGA TATACGCCAA GCGGTACTCA ATAAATTAGT CGCATTAGGG CCGGTATTTA TTAAAGGCAA ACCTGCAGGG GCATGGGCAA CCTTAGTCTT TGAGCAAGTT GAAGATTTGC ATGACTTTTA TGCTAAATAC CTACCGCAGA TGATGTTGGC GGGGTTTATT CCTTTACTGA TATTAGCCTG TGTATTTCCG CTTAATTGGG CCGCTGGGAT CATTTTAATG ACAACGGCAC CATTGATTCC GTTATTTATG ATTTTAGTGG GTATGGGCGC CGCAGATGCT AATCGTAAAA ATATGCAGGC GTTGTCGCGT TTAAGCGGCC ACTTTATGGA TCGCCTAAAA GGCCTGCAAA CGTTAAAGTT GTTTAATCGC GGCGAAGCAG AGTTAGTGAA TATTGAACAT GCTTCAGAAG ATTTTCGTGC CCGGACGATG TCGGTATTAC GCTTAGCCTT TCTTAGCTCC GCGGTATTAG AGTTTTTTGC CGCGGTATCG ATTGCCGTAT TGGCGGTGTA CTTTGGCTTT AGTTACTTAG GTCATTTAGA TTTTGGTCAC TATGGCGTAC AGGTAAGTTT GTTTACCGGC ATGTTTGTGT TGATTTTAGC GCCAGAATTT TACCAACCCC TGCGAGACTT AGGCACTCAT TACCACGCCA AAGCTCAAGC AATTGGTGCT GCAGAAGCGC TGGTTGAGCT GCTTGATTAT CAAGTTAATA CACCCGCTAA AATCCATTCA ACATCATTAA ATATGGCGTT TACAGCCGAA AGTATAAACA TTCAAGCGAT TGGGGTTGAA GTGTTTAGCT TAGATGGACA GCGTTTAGCT GGGCCTATTT CATTTACATT ACCCGCTGGT GAGCATTGGG CTATTGTGGG CCCGAGTGGC GCGGGTAAAA CCAGTTTACT GAATGCGTTG CTAGGTTTTT TACCTTATCA GGGATCGTTG CTCATTAATG GTCAGGAATT GTCACAACTT AATGTGGCCC AGTGGCGTCA ACATTTGGCT TGGTTAGGAC AAGATCCGCA ATTGTTTCAT GGCACGGTGC GAGAAAATGT CGCGTTGGCC AATCCGCAAT TAAACGATGC GCAGATTATG ACGTTGCTAG AACAAGCTGA TATCAGTGAG TTTGTAAAAC AACAACCATT AGGCCTCGAT TTAGTGATAA GCGACCAAAG TGCAGGTGTG TCAGTGGGCC AGGCACAACG TTTTGCTTTA GCACGTGCAT TGGCTCAACC CGCAAAATTG TTTTTATTAG ATGAACCTAC CGCTAGCTTA GATGCCCAAA GCGAGCAATC AGTGCTGACT TCGTTGTACC GTGCGATGCA GTCGACAACA GCATTAACTG TTACCCATAA ATTAGATGAT CTACACAACA TGAATTACAT ATTGGTGATG GATAACGGAA TGGTGGTACA ACACGGTCAT GTAAATGATT TACGGCAGGC TGATGGATTA TTAGCACAAA TGCTCAATCA ACAACAGAAT CTACAACAGG AGGTGAGCTG A
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Protein sequence | MDKSLEKSLA KWLKSQQSSC GIFLKLSVLC GVLNGIAIVA QAYFIAQILQ GVIIDNLVPA ALSLQFFALI GLLFVRALLA QVRERISFEA GKRLRTDIRQ AVLNKLVALG PVFIKGKPAG AWATLVFEQV EDLHDFYAKY LPQMMLAGFI PLLILACVFP LNWAAGIILM TTAPLIPLFM ILVGMGAADA NRKNMQALSR LSGHFMDRLK GLQTLKLFNR GEAELVNIEH ASEDFRARTM SVLRLAFLSS AVLEFFAAVS IAVLAVYFGF SYLGHLDFGH YGVQVSLFTG MFVLILAPEF YQPLRDLGTH YHAKAQAIGA AEALVELLDY QVNTPAKIHS TSLNMAFTAE SINIQAIGVE VFSLDGQRLA GPISFTLPAG EHWAIVGPSG AGKTSLLNAL LGFLPYQGSL LINGQELSQL NVAQWRQHLA WLGQDPQLFH GTVRENVALA NPQLNDAQIM TLLEQADISE FVKQQPLGLD LVISDQSAGV SVGQAQRFAL ARALAQPAKL FLLDEPTASL DAQSEQSVLT SLYRAMQSTT ALTVTHKLDD LHNMNYILVM DNGMVVQHGH VNDLRQADGL LAQMLNQQQN LQQEVS
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