Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3192 |
Symbol | |
ID | 4280094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3822643 |
End bp | 3824334 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638136010 |
Product | sulfite reductase subunit beta |
Protein accession | YP_751867 |
Protein GI | 114564353 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGC AAAAGTTAGC GTTAAACGAA TACTTAAAAA TCGACAGTGA TTATTTACGC GGCGACATCC AAGAGGGTTT AGATACTCAA GTGACTGGAT CGTTTAGTGA TGGCGATCAG CAGTTGATCA AATTCCACGG TTTTTATCAG CAAGACGATC GCGATTTACG TAACGAACGT AAAGAGCAAA AGTTAGAACC ATTACATAGC TTTATGCTAC GTGCTCGTGT ACCTGGTGGT ATTTGTACTC CAGCGCAGTG GTTAGAAGTG GATAAAATTT CATCTACGCT AACCACCTCA AACAGCATTC GTTTAACCAC GCGTCAAACG TTTCAGTACC ACGGCATTCC TAAGCGTAAT CTGAAAACCT TGATCCAAGG TCTTGATCGT GCCGCACTCG ATTCTATTGC CGCTTGTGGT GACGTAAACC GTAACGTGAT GTGTAACCCA AACCCGGTTG AATCTAAGTT ACATGCTCAG GCGTATGCGG TTGCCAAGCA TTTATCTGAT CATCTATTAC CGCACACTCG CGCTTACGCT GAGATTTGGT TAGATGAAGA AAAGCTATTA GGCACCGAAA CGGTTGAACC GGTTTACGGT AAAACCTATT TGCCACGTAA ATTTAAAATG GCGGTTGCAG TTCCACCACA TAATGATGTC GACGTATACA CCAACGACCT TGGTTTTATT GCGGTATCAG AAGCCGGCGA GTTAATTGGC TTTAACTTGG TTGCGGGTGG CGGTATGGGG TCTACCCACG GTGAAGTAGA AACCTTCCCA CGTTTAGCTG ACGACTTTGG GTTTATTAAA ACTGACGACG TTACCAAGTT TGCCGAAGCG GTAATGACCG TTCAACGTGA CTGGGGTAAC CGTGTTGTAC GTAAACGTGC GCGTTTAAAG TACACCATTG TTGACCACGG TTATGATGCA TTTAAAGCAG AAGTAGAGAA ACGTGCTGGG GTTAAGTTTG AGCCTAAGCG TGATGTGATC ATTGGCGATC GCGGCGACCG TTATGGTTGG GTTGAAGGTA TCGACAATAA GTTCCATTTA ACGCTGTTTA TTGAAAGTGG CCGTATTAAA GATATGCCAG GTCAAACCTT GCAAACCGGT CTACGTGAAA TAGCCAAAAT CCATAAAGGC GATTTCCGCA TGACATCTAA TCAGAACATG ATTATTGCCG GTGTCGCTGC ACAAGATAAA GCTGAAATTG AAGGGTTAGC GCGTAAACAT GGTTTATTAG GCCAAGTGCT AAGTGGTACT CGCGGTCATT CAATTGCCTG TGTGGCATTG CCAACTTGCC CATTAGCGAT GGCAGAAGCT GAACGTTACT TCCCTGAGTT TATTGATCAC ATTGATGCAC TACAGGCTAA GCATGGTATT AGCGAGCAAT CAATTGTGGT GCGTATGACC GGTTGTCCAA ACGGTTGTGC CCGTCCATTT GCGGCTGAAA TTGGTTTAGT GGGTAAAGCT CCTGGGCGTT ACAATTTGTA TTTAGGCGCC AGCTTTGAAG GCACGCGTTT AAATAAAATG CATAAAGAAA ACATTCAAGA AGCTGAAATT TTAGCTGAAT TGGATACCTT GTTTGGCCGC TACGCCACAG AGCGCGATGC GGGCGAAACC TTTGGTAACT TCACTGTGCG CATTGGCGTA GTGAAGGCGG TTAATGACGC CGCTAAGGAT TTTCATGCCT AA
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Protein sequence | MSEQKLALNE YLKIDSDYLR GDIQEGLDTQ VTGSFSDGDQ QLIKFHGFYQ QDDRDLRNER KEQKLEPLHS FMLRARVPGG ICTPAQWLEV DKISSTLTTS NSIRLTTRQT FQYHGIPKRN LKTLIQGLDR AALDSIAACG DVNRNVMCNP NPVESKLHAQ AYAVAKHLSD HLLPHTRAYA EIWLDEEKLL GTETVEPVYG KTYLPRKFKM AVAVPPHNDV DVYTNDLGFI AVSEAGELIG FNLVAGGGMG STHGEVETFP RLADDFGFIK TDDVTKFAEA VMTVQRDWGN RVVRKRARLK YTIVDHGYDA FKAEVEKRAG VKFEPKRDVI IGDRGDRYGW VEGIDNKFHL TLFIESGRIK DMPGQTLQTG LREIAKIHKG DFRMTSNQNM IIAGVAAQDK AEIEGLARKH GLLGQVLSGT RGHSIACVAL PTCPLAMAEA ERYFPEFIDH IDALQAKHGI SEQSIVVRMT GCPNGCARPF AAEIGLVGKA PGRYNLYLGA SFEGTRLNKM HKENIQEAEI LAELDTLFGR YATERDAGET FGNFTVRIGV VKAVNDAAKD FHA
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