| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3183 |
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| Symbol | |
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| ID | 4280085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3810919 |
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| End bp | 3812085 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136001 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_751858 |
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| Protein GI | 114564344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA AAGTCTGTAA CCAAGCTCGC CGTCATATGT TAAAAGGCCT TGGAGCAGCC
ACATTATTAA GCCCTTTAAG CTCATTTCCT GCATGGGCCG CTAAACCACG TCGTTTATAC
ATTGATGGTT TATCATTTTT ACCGACCGAC ATCAATGATG TTAAAGCCTC AAAACTCGAC
GCCTTTATCG CCGATGTCTC GGCGATTGAA ACCATTGAAC AAGCTGATGG CACTAAAAAT
TACAAACGCA CTTATGAAGC CTGCATCAAC AGTATTACCC AAGCGGCTAA TTCGGTAAAA
GCCAATCCAG ACGTGTACCT GCAAGGGCTT ACAGGTACTG ACATTAGTAA AGCTAAAACA
CAGCAACAAA CCGCGGTGTT TTTTCAAATT CAAGGCGCTG ATTGTGTTGA AAATGACGGT
TTAAGTAATG AATGGCAACA ACTAGATAAT TTGCATCAAC AGGGTTTACG GGTACTGCAG
CTGACACACC ATTATGGTAA TCGTTATGCC GGTGGTGCAT TAGATAATAA TGGCTTAAAT
AGTTTAAATA CCCCATTAAC CGGCGCTGGG CGTGAGCTCA TAACAGAGCT TAATCGGAAA
AATATTCTTA TCGATGTGAG TCACTCAAGC GCCCAAACGG CCCTTGATGC AATAAAAGCC
AGCCAGTCTC CTGTAATGCA AAGCCATGGT GCTGCGCGCG CTATTGTCAA CAATGCCCGT
TGCTCACCCG ATGAAGTTAT CCGTGCCATT GGCGATAACG GCGGAGTATT TGGGGTGTTC
ATGATGAGCT TTTGGCTCAC CAACAAGCCA ATTCCAACGA TAGAAGACTA CATAAAGCAA
CTTGCTTATA TTGCTAAAGT GGGCGGCTTT GATTGCGTAG CCATCGCCAA TGATTTCCCA
CTGCGTGGTC AAGAAAACCT ATTAGCGTTA GATAACAATA ATAGCGAAGG GATAAAAGAG
TACCTTGAGT GGTGGCACAG CTTAGAAGAC AAAAATGTAT TAGGTTTTGA CGTTGAACCC
AAGCATGTAG TGATTCCAGA GCTCAACAGT ATCGACCGCA TGAGCCGCAT CGACGATGCC
TTGAAAAAAG CTCGTTTCAA ATCTACCGAT CGCGATCGTT TTATGGGTGA AAACTGGCAA
AGAGTGCTCA AACAAGTATT GGTATAA
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| Protein sequence | MTQKVCNQAR RHMLKGLGAA TLLSPLSSFP AWAAKPRRLY IDGLSFLPTD INDVKASKLD
AFIADVSAIE TIEQADGTKN YKRTYEACIN SITQAANSVK ANPDVYLQGL TGTDISKAKT
QQQTAVFFQI QGADCVENDG LSNEWQQLDN LHQQGLRVLQ LTHHYGNRYA GGALDNNGLN
SLNTPLTGAG RELITELNRK NILIDVSHSS AQTALDAIKA SQSPVMQSHG AARAIVNNAR
CSPDEVIRAI GDNGGVFGVF MMSFWLTNKP IPTIEDYIKQ LAYIAKVGGF DCVAIANDFP
LRGQENLLAL DNNNSEGIKE YLEWWHSLED KNVLGFDVEP KHVVIPELNS IDRMSRIDDA
LKKARFKSTD RDRFMGENWQ RVLKQVLV
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