| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3152 |
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| Symbol | |
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| ID | 4280054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3772508 |
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| End bp | 3773731 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638135970 |
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| Product | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein |
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| Protein accession | YP_751827 |
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| Protein GI | 114564313 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0965219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAA CTAAAACTTA TGATGTTGCC ATCGTCGGCG GTGGTATGGT CGGGCTTGCA
ACCGCAATCG GTTTAGCCAA TGCCGACCTT AATGTGGTGG TTATCGATGC TGGCACAACC
CAAGCTGTCA GCGGTGAGCC TAAATTGCGC GTCAGTGCTA TTAACAAAGC CAGCCAACAA
CTGCTGGAAA ACCTCGGTGC TTGGCAATAC CTCGACGACA ACCGTGTTAG CCCTTACCAA
AAAATGTCGG TATGGGACAA AGACGGCCTA GGTAAAATTG AGTTCGACGC CCACAGTATC
AGCGAAGCCT ATTTAGGTTC GATCATTGAA AACGACGCCA TCAGTTACGC CCTTGCCAAA
CGCGCCAGCG AAATAAGCAA CATTACCCAT ATTGAAAACC AACGCCTTGA GCGTGTAGCC
TTTGGCGAGC GCGAAGCTTG GCTAACCCTA GCCAATGGTG ATAACGTCAG TGCCGCCGTG
GTGGTTGCCG CCGACGGAGC TAATTCTTGG GTGCGTCAGC AATGCAGTAT TCCGCTAACC
TTCTGGGACT ACGGCCACCA TGCCATTGTC GCGACAGTGC GCACCGAACT TGCCCACGAC
GCCACCGCCA GACAAGCCTT TTTACCTGGC GGTCCATTAG CTATGTTGCC ACTGTACGAC
GACAATTTAT GCTCCATCGT CTGGTCAGTA TCGCCCGACC AAGCCGAGCA ATTGTTGGCA
TTAGACGATA TCGAATTTGG CAAAGCATTA ACTGCCGCGC TCGATGGCCG TTTAGGCATG
TGCCAGGTGG TTAGCGAGCG TCAATCATTC TCGCTTCGTA TGCGTTATGC GCGCCACTTT
GCCCGCCATC GATTAGTACT GGCTGGCGAC GCTGCTCACA CCATTCATCC GTTAGCTGGC
CAGGGGGTTA ACCTAGGCTT TTTAGACGCA GCTAGCATCA TCGACACCTT TACCGAACTG
CACCAGCAAG GCAAAGATTT AGGCGAATAC AGCCATTTAC GCGCCCTTGA ACGTTGGCGT
AAAGCAGAGG CGATGGAGAT GATTGCCACC ATGGAAGGCT TTAAAAGACT GTTTGCCGGC
AGCAATCCGC TTAAAAAAGC CATGCGCGAC ATAGGCCTAA CCCTAGTTGA TAATGTCGCT
GGGCTGAAAA CAGTGTTCAT CAAACAGGCT ATGGGTAACA AAATGACATT ACCTAAACTT
TGTCGCGAGC CAATTTCATC ATAG
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| Protein sequence | MFSTKTYDVA IVGGGMVGLA TAIGLANADL NVVVIDAGTT QAVSGEPKLR VSAINKASQQ
LLENLGAWQY LDDNRVSPYQ KMSVWDKDGL GKIEFDAHSI SEAYLGSIIE NDAISYALAK
RASEISNITH IENQRLERVA FGEREAWLTL ANGDNVSAAV VVAADGANSW VRQQCSIPLT
FWDYGHHAIV ATVRTELAHD ATARQAFLPG GPLAMLPLYD DNLCSIVWSV SPDQAEQLLA
LDDIEFGKAL TAALDGRLGM CQVVSERQSF SLRMRYARHF ARHRLVLAGD AAHTIHPLAG
QGVNLGFLDA ASIIDTFTEL HQQGKDLGEY SHLRALERWR KAEAMEMIAT MEGFKRLFAG
SNPLKKAMRD IGLTLVDNVA GLKTVFIKQA MGNKMTLPKL CREPISS
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