| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3150 |
|---|
| Symbol | |
|---|
| ID | 4280052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3770722 |
|---|
| End bp | 3771111 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638135968 |
|---|
| Product | glycine cleavage system protein H |
|---|
| Protein accession | YP_751825 |
|---|
| Protein GI | 114564311 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000198497 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTA TTCCAGCAGA CTTGAAATAT GCATCTTCGC ACGAATGGAT CCGTAAAGAA
TCAGACGGTA GCTACACAGT AGGTATCACT GAGCATGCTC AAGAGCTATT AGGCGACATG
GTATTTGTAG AATTACCAGA AGTTGGCGAC ACAGTAACTG CCGGTGAAGA CTGCGCAGTA
GCTGAATCAG TTAAAGCGGC ATCAGACATC TATGCACCTA TTTCTGGTGA AGTGATTGCC
GTAAACGAAT CTTTAGAAGA TTCGCCAGAG CTTGTTAACA GCGACGCATT TGGTGACGGT
TGGTTCTTCC GTGTTATGCC TTCTGACGAA TCAGAAGTGG ATGCATTATT AGATGCAGAC
GGTTACCAAG AAGTGATTGA CGAAGAATAA
|
|---|
| Protein sequence | MSTIPADLKY ASSHEWIRKE SDGSYTVGIT EHAQELLGDM VFVELPEVGD TVTAGEDCAV
AESVKAASDI YAPISGEVIA VNESLEDSPE LVNSDAFGDG WFFRVMPSDE SEVDALLDAD
GYQEVIDEE
|
|---|
| |