| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3128 |
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| Symbol | |
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| ID | 4280031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3741966 |
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| End bp | 3744395 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638135947 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein |
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| Protein accession | YP_751804 |
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| Protein GI | 114564290 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGCA GAAGTTTCTT AAAAATGAGT GCCGCACTAA GTTGCGTAGC AACGGTTTCA
GGCTGTAACT CAAGCTCTAA AGATGTTGAA GTAGTGCCGC CTACGCCACC TGTTGCCGGT
GAAAACCTCA ACTGGTCGGC TTGTTTGGTT AACTGTGGAT CTAACTGTCC GGTACAGGTT
TTTTCTACCG ATGGGGTAAT TACCCGGGTA GAGTCTCAAT TTACCACCAC AGATAAGTAC
GGCGATCATG ATGTGCGCGC TTGCCCACGG GGACGCTCTT TGCGTAAACG TGTTTATGCA
CCTGATCGTC TGAAATACCC AATGAAGCGT GTTGGTCCTC GTGGTAGCGG ACAATTTGAG
CGGATTAGCT GGGATGAAGC CCTTGATCTT GTCGCTGAAA AACTGCAAGG CACTATAGAT
CAGTACGGTA ATGAATCGAT TCACTTCACC TATAACTCGG GTGCACGTTA TCACTTCTCC
GGTAAGCAAT GTCTGTATCG CTTAATGAAC CTTAAGGGCG GTTATCTTAA CGCTTATGGC
GATTATAGCT GGTCACAAAT TTATGAAGCA GCCGGACAAA CATATGGCTC TGCAGGCCCT
GGTTGGCAAG GAAGCAGTGT GTCTGAAATG CAAAACTCAG ACTTAGTGCT GATGGTTGGT
TACAACCCAT CCGAAATCCG CATGAGTGGT TCGGGCGAAG CCTATGACTT CTTGGTGCAG
AAACAAAAGC ATAACTTTAA AACTATCTTG ATTGATCCAC GTTACACCGA CTCTGCCGTA
GGTAAAGAAG ATCAGTGGCT GGCAATTCGT CCGGGTACCG ACGCGGCGCT ATTTGAAGCC
TTAGCCTATG AATGGATCAC CACTAACACC GTTAATCAGG CCTTCCTGGA TAAATACTGT
GTCGGTTATG ACGAGAAAAC CATGCCTGAA GGCGTTGGAT ATGAAGAGAG CTACAAGGCG
TATATTCTCG ATAACGCGAA AGTTGGCGAC TTAACTCCGG GTGTTAATGC TAAAACGCCA
GAGTGGGCTG CTGCTATTAC CGGTATCGAA GCTCATCTCA TTGTCGAGTT GGCCCGCGAA
CTGGCTGCGG CTCGTGCACC TTTCATTCAA ATTGCCGCCT CGCTAAACCG TCAGGCTGCT
GGTGAAAACA ACACCCGTGC GGGTTACATG CTACCCATCC TGTTAGGTCA ATTGGGTCTG
CCGGGCACTA ACTGTGGTGG TTTGTGTAAG GGCTCTTCTT TACACGCGCC ATCAATGCCT
ACTGGCTCAA ACCCAGTGAA GAAAGCGATA TCATTCTTTA CCTTCACTCA GGCCATCGAA
GACGGCAAAA ACATGACCGT TCTGTCCGAT GGAGTACAAG GTGTCGACCT TGATGAAGCG
GGTGACGGTA AGTTGGATAC TGATATTAAG GCGATTATCA ACTACGGTGG TAATGCCCTA
ATTAACCAAC ACTCTGACGT GCGTAAAACA GAGAAGCTCC TCCAGGATGA AACTAAATGT
GAATTTATCC TAGTGGTCGA TAATTGGATG ACACCCAGTG CCAAGTTTGC CGATGTTTTA
TTGCCAGACG TGTCATGGCT TGAATCAGAA GACTTAGTTA ACCAAAGTTA CGCCGCAGGT
GATACCGCCT CCTTGGTACA GATGAGCAGC AGTGTCGACC CTATGTTCGA GAGCCGTCCT
ATCTATGAGG TCTGTGTCGA CTTAGCAAGA CGCATGGGGG TTGAAGCCGA GTTTACCGAA
GGTAAGAGTC GCAAAGATTG GTTGGATCAA TTCTATGCCG AATCTAAAGA GGCAACCCCA
GAATTACCAG CAAAAGAGGT GATGCTCACA CAGGGTATCT ATCGCAAATA TTTGCCGAAC
GGGGGTTATA TCGTACTGGA AGATTTCCGT ACCGATCCCG ATGCCAATCC ACTCGGCACA
CCCTCTGGAA AGATTGAAAT CTACTCATCA CGCTTAGCGG AAAAAGCGCG TACCTGGAAG
CTCAAAGAGG GTGACGTAAT ATCTGCGCTA CCTAAATACG TGCCGACCTG GGAAGGTTAT
GAAGATACTG AGACCAAGAA GAAGTACCCA TTACAACTTA CTGGTTATCA CACTAAGGGC
CGTGCCCACT CTAGTTTTCA CAACGTCCCT TGGCTGCGTG AAGCGGTGCA GGATGCTGTG
TGGATGAACC CAATCGATGC TAATCAGCGC GGACTTAGCA CTGGTGATAA GGTCCACATT
TTCAATGATC GCGGCACCAT CGAAGTCGAA GTTAAGGTAA CACCTCGTAT TATGGTCGGC
GTAACAGCAC TGGGGCAGGG CGCTTGGTTC CTACCTGGTG GCAATGTGGA TAAAGGCGGT
TGTTTGAACG TGCTTACCAC ACAACGCACT ACACCGATAA CGAAAGGTAA TCCTCAGCAC
ACTAACCTGG TTGAAATCCG TAAGGTCTGA
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| Protein sequence | MERRSFLKMS AALSCVATVS GCNSSSKDVE VVPPTPPVAG ENLNWSACLV NCGSNCPVQV
FSTDGVITRV ESQFTTTDKY GDHDVRACPR GRSLRKRVYA PDRLKYPMKR VGPRGSGQFE
RISWDEALDL VAEKLQGTID QYGNESIHFT YNSGARYHFS GKQCLYRLMN LKGGYLNAYG
DYSWSQIYEA AGQTYGSAGP GWQGSSVSEM QNSDLVLMVG YNPSEIRMSG SGEAYDFLVQ
KQKHNFKTIL IDPRYTDSAV GKEDQWLAIR PGTDAALFEA LAYEWITTNT VNQAFLDKYC
VGYDEKTMPE GVGYEESYKA YILDNAKVGD LTPGVNAKTP EWAAAITGIE AHLIVELARE
LAAARAPFIQ IAASLNRQAA GENNTRAGYM LPILLGQLGL PGTNCGGLCK GSSLHAPSMP
TGSNPVKKAI SFFTFTQAIE DGKNMTVLSD GVQGVDLDEA GDGKLDTDIK AIINYGGNAL
INQHSDVRKT EKLLQDETKC EFILVVDNWM TPSAKFADVL LPDVSWLESE DLVNQSYAAG
DTASLVQMSS SVDPMFESRP IYEVCVDLAR RMGVEAEFTE GKSRKDWLDQ FYAESKEATP
ELPAKEVMLT QGIYRKYLPN GGYIVLEDFR TDPDANPLGT PSGKIEIYSS RLAEKARTWK
LKEGDVISAL PKYVPTWEGY EDTETKKKYP LQLTGYHTKG RAHSSFHNVP WLREAVQDAV
WMNPIDANQR GLSTGDKVHI FNDRGTIEVE VKVTPRIMVG VTALGQGAWF LPGGNVDKGG
CLNVLTTQRT TPITKGNPQH TNLVEIRKV
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