Gene Sfri_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3117 
Symbol 
ID4280020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3728931 
End bp3729557 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content43% 
IMG OID638135936 
Producthypothetical protein 
Protein accessionYP_751793 
Protein GI114564279 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.149179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTG AGCTTTATTT TATCTACGAC TCACATTGCC CTTGGAGCTA TGCCACCACA 
CCGTTGGTGA ATGCATTGCA GCAAGCCTAT CCTGAAATGA ATGTACATTT ACTGCATAGC 
GCACATTACA TTGGCAAAGA CAGTGCTGGC GAAGAGCAAA TGGAAGCGGC TGCAAGAATG 
AGTGGACTAA AATTTGGCCG CGATCATATT CGTTACGTAA ACAGTCCTAA AAGCTCAATC 
AAAACCGCAA ACTTTATGGC CTGGTTGCAG GGCAAACAAG CTGACAAGCA ATTAGATGTG 
CTCAATGCGC TACAAAGAGC TCATTTCATT GAAGGCAACC CACTTAGCAA TAAGCACGAC 
TTTAATGACA TCGTAGAAAA ATTTAAGCTG TCACCATCAA ATAAAGTGTT TAAAGATGAG 
CTCAGTATGG ACGCAGAATA CGTACTGGAA GGCATAGAAG AGATCCAACA AGTCATTGGT 
ACTACCGGCT TCCCCGTTTT AGTCATGACC GTTAATGATA ACGCCATTTT TATCGATCAT 
TCACAATATC TGAGTAGCCC TCATGCTGTG GTTGCTGCGG TTGAAAAAGA AATAGCTGCG 
ATTAAACTCG CGAAAACGGA ATCGTAG
 
Protein sequence
MTTELYFIYD SHCPWSYATT PLVNALQQAY PEMNVHLLHS AHYIGKDSAG EEQMEAAARM 
SGLKFGRDHI RYVNSPKSSI KTANFMAWLQ GKQADKQLDV LNALQRAHFI EGNPLSNKHD 
FNDIVEKFKL SPSNKVFKDE LSMDAEYVLE GIEEIQQVIG TTGFPVLVMT VNDNAIFIDH 
SQYLSSPHAV VAAVEKEIAA IKLAKTES