Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3081 |
Symbol | apaH |
ID | 4279984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3688208 |
End bp | 3689026 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135900 |
Product | diadenosine tetraphosphatase |
Protein accession | YP_751757 |
Protein GI | 114564243 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
TIGRFAM ID | [TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACACT ATTTTGTCGG TGATATTCAG GGGTGCTATT CAGAGTTACA ACTATTGTTA CAAAAAGTGG CTTTTAACCC ATCCAAAGAT CAACTTTGGG CCGTGGGTGA TCTTGTGGCA AGAGGTACTG AATCGTTAGC AACACTCCGT TTCTTCCAGT CGTTACAAGA TTCAGCAAAA GTGGTACTGG GCAATCATGA CTTACATCTT TTGGCTCTGC ACGGGAAATT GAAGCGGCCC CATCCACAAG ATCATCTTGA TGAATTACTC AACGCTCCTG ATATTGATAA TTTAGTCAAT TGGCTCCGCC AACAACCCTT AGTCAGAACC TTACCTGAAC ACAATATCAT CATGACCCAT GCTGGTGTGC CTCCACAATG GGATATAGCA ATCCTTGAAC ATGAAGCTGA GCAGGTCAGT TTTGCATTAC AGCAAGATGA TTATCTAAGC GCATTAATTG CCCAAATGTA CACAGAAGAT GCTGAGCACT GGTCTCCATC GTTGCACGGT ATCGACAGAC TACGTTATTG TATCAATGCA TTAACACGTA TGCGTTTTTT ACACCTTGAT GGTCGTCTTG ATTTTAAATG CAAATTACCG CCTAGCGAAC AGCATTCTAC CGAGTTACGC CCATGGTTTG AGTTTGCATC AAAAACAGCG CCGCAAAACA CCCTTATATT CGGTCATTGG GCGGCGTTAA TGGGCCAAAC AGGTAATCCG CACGTTGTCG CATTAGATAC AGGCTGCTGC TGGGGAGAGC ATTTAACATT ATGGCATCTT GAAAAGAATG AAATAATTAC CCAAAAAAGG TTAATTTAA
|
Protein sequence | MAHYFVGDIQ GCYSELQLLL QKVAFNPSKD QLWAVGDLVA RGTESLATLR FFQSLQDSAK VVLGNHDLHL LALHGKLKRP HPQDHLDELL NAPDIDNLVN WLRQQPLVRT LPEHNIIMTH AGVPPQWDIA ILEHEAEQVS FALQQDDYLS ALIAQMYTED AEHWSPSLHG IDRLRYCINA LTRMRFLHLD GRLDFKCKLP PSEQHSTELR PWFEFASKTA PQNTLIFGHW AALMGQTGNP HVVALDTGCC WGEHLTLWHL EKNEIITQKR LI
|
| |