| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3077 |
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| Symbol | |
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| ID | 4279980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3684662 |
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| End bp | 3685966 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135896 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_751753 |
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| Protein GI | 114564239 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA GTAAAAAAAT AATTTTTGCA TTACTAGCGT TAGCTATGAG TAACACCAGT
ATGGCTGCGC CAATGCCATT AGATCGCGTA TCAGTACAAA TTAATGATGG CATTATTCTT
GAGAGTGAAA TCACCAACAT GGTTTCAACT GTTAAAGCCA ATGCTAAAGC AGCGAATCAA
ACATTACCAT CTGATGATGC CTTGCGCACT CAGGTAATCG AACGTCTCAT TTTAACTCAT
TTGCAAATGC AAATGGCTGA ACGTATCGGC CTGCAGATTG GTGATTTACA ATTAGACCAA
ACGATTGAAA ATATTGCTAA AGAACAAAAA GTAACCGTTG CGCAAATGCA GCAGACTATT
GAAAGCGAAG GTACGAGCTT CAGTCAATAT CGCGAACAGT TACGTCAAGA AGTCACCCTA
GGTGAAATTC AGCGCATTCA AGTGCAACGC CGTATTCAGG TTTCACCACA AGAAATTAGT
GGTTTAGTGA AATTGATTCA AGAACAAGGC TTAAAAGATG TTGAGTTTCA AATTGGTCAC
ATTCTAATTG AAGTACCAAG CAACCCAACG AGCGAACAAC TTGAAGGTGC TAGCCGCCGT
GCAGAAATCG TGCTTAAACG TTTAAACAAT GGCGATGACT TCCGTAGCAC CGCTATTGCG
TCTTCATCAG GTCCTAAAGC GCTAGAAGGC GGGATCTGGG ACTTTATGAA CATTAACGAA
ATGCCAACCT TGTTTGCTGA AGTTATCAGT AACGCCAAAA AAGGTGACAT AATCGGTCCG
ATTAAATCGG GTTCAGGCTT CCATATTATT AAAGTAGTCG ACACTCGTGG TTTACAAACC
CAAGAAGTTG AAGAAGTAAA ATCGCGCCAT ATCCTGTTAA AGCCATCTCC GATATTATCG
GAAGATCGTG CTAAAGCGAT GTTGGCTAAC TTTTTAGCTC AAGTTCGTGC AGGTGATGCT
GATTTTGCTA AATTAGCCAC TCAGTACTCT GAGGATCCTG GTTCTGCAGC TAAAGGTGGT
GAGTTAGGTT GGGCAGACCC AAGCATGTAT GTGCCAGAAT TTACTCAAAC ACTAGCCAGT
CTTCAGGAAG GCCAATACAG TGAGCCTTTC CGAACTACTC ATGGCTGGCA TGTTGTCCAA
CTTGAATCGC GTCGCAAAAC AGATGCAACT GAACAATTTA ACAGTAACCG TGCTCATCAA
TTAATCTTCC GTCGTAAGTT TAATGAAGAG TTACAAAACT GGTTAGACGA AATGCGCTCT
GAAGCGTATA TCGAAATCGT TGAGCCAGAA AGCAAACGAG GCTAA
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| Protein sequence | MKHSKKIIFA LLALAMSNTS MAAPMPLDRV SVQINDGIIL ESEITNMVST VKANAKAANQ
TLPSDDALRT QVIERLILTH LQMQMAERIG LQIGDLQLDQ TIENIAKEQK VTVAQMQQTI
ESEGTSFSQY REQLRQEVTL GEIQRIQVQR RIQVSPQEIS GLVKLIQEQG LKDVEFQIGH
ILIEVPSNPT SEQLEGASRR AEIVLKRLNN GDDFRSTAIA SSSGPKALEG GIWDFMNINE
MPTLFAEVIS NAKKGDIIGP IKSGSGFHII KVVDTRGLQT QEVEEVKSRH ILLKPSPILS
EDRAKAMLAN FLAQVRAGDA DFAKLATQYS EDPGSAAKGG ELGWADPSMY VPEFTQTLAS
LQEGQYSEPF RTTHGWHVVQ LESRRKTDAT EQFNSNRAHQ LIFRRKFNEE LQNWLDEMRS
EAYIEIVEPE SKRG
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