| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3076 |
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| Symbol | |
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| ID | 4279979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3682217 |
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| End bp | 3684517 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135895 |
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| Product | organic solvent tolerance protein |
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| Protein accession | YP_751752 |
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| Protein GI | 114564238 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1452] Organic solvent tolerance protein OstA |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCC GTTATTTTCT GGCACTAAGC CTACTCCCAA ATATCGTGTT GGCTGATGAG
CCAACAACGA CCGAAGCGCC TTCATTGCAA TGCGTTGTTG CTCCTCCTGT GTCTCGTTCA
TTCGAAGACC GTGAGGCATT AACCGGCATA TCAGACGATC AAATTGTTAT CATTAGTGAT
CACTCCAGCG TTGCTTACAA TAATCAAGCT GAGTTTTCGG GTGATGTCAG TTTCAGCCAA
GGACTTCGTC ATATTGCGGC TGATAACGCT GTATTAGATC AAAAAGAACA ACGCTTAAAT
GCAGACGGTA ACCTTATCTT TAAAGATGAG TTATTTACCG TTACGGCAGA TACCTTAGAA
GCCCAGATGA GCACCAATAA CGCCACCCTA AAAGGCGCTC AATATTGGCT ACATGGGCAA
CAAGTGCATG GCGATGCTGA AAAACTACAG ATCACTTCAG ACAATAATCT ATTGCTAACA
AAAACCAACT TCACTACCTG TCCTCCTGGT GACGAATCAT GGTTACTCGA AGCTGACATG
ATCAAAATTG ACAGCAAAGA AGAATGGGGT GAAATTTGGA ATGCCAAGCT GCGTATTGCC
AATATTCCAG TGTTATATAT TCCGTATATG ACTGTACCTG TATCAGATAA GCGTAAAACT
GGTTTCTTAT TCCCAAGTTT TAGTACCAGC ACCACTAACG GTGTAGAAGT TAGTACTCCG
TATTATTGGA ATATCGCGCC AGAGTTTGAC TTAACTTTCA CACCAGACTT CATGTCTTCG
CGTGGGCTAT ATACCAAAAC AGAGTTTCGC TATCTTGCTG GAGAACAGCA AAATGGTCAG
TTCAATGTTG AATATTTAGG CAGCGATAGT AAGCTAACAT CTAATGCTGA CCGTTATTTG
TATCACTGGA GCCATCAAGG CGCAGTTAAC AAAAACTGGC GAGTGAGATC AGACTATACC
GATGTGTCCG ATAACAATTA TTTCAACGAT TTAAATTCTG ACGTTAATCA ATCAACCGAT
AACCAATTAT CACGGATCGG TGAAGCCAGT TATTTTGAAC GCGACTGGGA CTTCAACATG
CGCGTGCAAG ATATTAAAGT GCTTGGCGAA GATGAAAAAC CATATCAAGT AATGCCACAG
TTAAACTTTA ATTATCGTTC TGCAGACATT TTTAACACTA TCGATTTTAA ATTTAATTCA
GAACTGACCA ATTTCCGCCA TCAAGATAAC GAATATAATA CCGCAACCCG CTTACATTTA
GTGCCAAGCT TAATTTGGCC GATACAAGGG CCTGCAGGTT CATTTACCAG TGAAGTTAAA
TTACTGCAAA CTCAGTATTG GCAGCAAAAT ATAGACGAAG ACTCAACATT AAACGACAGT
ATAAGCCGTA CGATCCCGCA AGCGCGTTTA CATGGCCAGG TGAATTTTGA GCGAGCAACC
CAATTGTTTG ATGAACAATA CCGTCAAACC CTGGAACCTC AAATTCAATA TCTTTATGTC
GGCTATGAAG ACCAATCCAA TATTGGTATT TATGACACCG CACAATTGCA AGAAGACTAT
TATGGTTTGT TCCGCGATCG CCAATATTCA GGCTTAGACC GTGTTGCAGA TGCCAACCAA
TTTACTTTAG GTTTTACTAC TCGTTTATTT GATCAAACTA ACCGCGAAAA ACTCAAGTTT
AGCGTAGGTC AAATCATGTA TTTAGAAGAC TCTAAAGTCA GTATTGACGA TACGTACGAA
GAAACGGCCC AGTCAACATC GGTATTAGCG GCTGAATTAG ATGCCCAATT ATACAACGAT
TGGTTTGTGA GCGGTTCAGT GCAACACGAC ACAGAAACGG GTGAAAACAA AAAGAATGAA
GTCACTTTAG ATTATCGTCC AAGTAGCGAC CGATTATTGC AGTTAAGCTA CCGATATGTA
CCCGACTTAT TAAATACTAA CACCAATGAC CAAGTTGATA TTTCCCAAGC CGGCGTACGT
ACCTCGTGGC CTATTAGTGA CAACTTATAC TTTGTCGGCA ACTACTATTA CGATCTCAAT
GAATCTCGTA ATATTGAAAC TTACACAGGC GTACAATATG AGTCATGTTG CTGGGCATTG
CGCTTAAGTT ATCATTATCG TATCAAAACC AACTATGACG ATGATTTATC AGAAAGCATT
GATGGACGCG AAGAGTTTGA AAGCGGTGTT TACCTAAACT TTGTCATTAA AGGTTTAGGA
GGTTCAGGTC CGTTAGGGGT AGACGACATG TTAAATGAAG GCTTATTTAA CTACCGTAAA
CCACTTTACT TGAGGAATTA G
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| Protein sequence | MQIRYFLALS LLPNIVLADE PTTTEAPSLQ CVVAPPVSRS FEDREALTGI SDDQIVIISD
HSSVAYNNQA EFSGDVSFSQ GLRHIAADNA VLDQKEQRLN ADGNLIFKDE LFTVTADTLE
AQMSTNNATL KGAQYWLHGQ QVHGDAEKLQ ITSDNNLLLT KTNFTTCPPG DESWLLEADM
IKIDSKEEWG EIWNAKLRIA NIPVLYIPYM TVPVSDKRKT GFLFPSFSTS TTNGVEVSTP
YYWNIAPEFD LTFTPDFMSS RGLYTKTEFR YLAGEQQNGQ FNVEYLGSDS KLTSNADRYL
YHWSHQGAVN KNWRVRSDYT DVSDNNYFND LNSDVNQSTD NQLSRIGEAS YFERDWDFNM
RVQDIKVLGE DEKPYQVMPQ LNFNYRSADI FNTIDFKFNS ELTNFRHQDN EYNTATRLHL
VPSLIWPIQG PAGSFTSEVK LLQTQYWQQN IDEDSTLNDS ISRTIPQARL HGQVNFERAT
QLFDEQYRQT LEPQIQYLYV GYEDQSNIGI YDTAQLQEDY YGLFRDRQYS GLDRVADANQ
FTLGFTTRLF DQTNREKLKF SVGQIMYLED SKVSIDDTYE ETAQSTSVLA AELDAQLYND
WFVSGSVQHD TETGENKKNE VTLDYRPSSD RLLQLSYRYV PDLLNTNTND QVDISQAGVR
TSWPISDNLY FVGNYYYDLN ESRNIETYTG VQYESCCWAL RLSYHYRIKT NYDDDLSESI
DGREEFESGV YLNFVIKGLG GSGPLGVDDM LNEGLFNYRK PLYLRN
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