Gene Sfri_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3064 
Symbol 
ID4279968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3671294 
End bp3672154 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content43% 
IMG OID638135884 
ProductMltA-interacting MipA family protein 
Protein accessionYP_751741 
Protein GI114564227 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA TGAATGTAAT TTTACTTAGA AGTTTGTTAT TGGGACTGCT GTTAACGCCT 
AACTTAGTAG TGGCTTCAGA CATAGCGACT AGCGTGAGCC GCGGCGGAGA ATCACGCCTT
GCTGATGGCG GTTACTTTGA GCTTGGAGCC AGTGTTTACG GTACCAATCA GTTAGATATT
CGCCAAACTG AACATGAGTC AGTGCAGCCT TCTTTACTCA TCAGCGGCAT GTATCAATAC
AAAGGTCTAT TTATAGAGAT GATACATGAA TCTCAAGATG GGATTAATTT GGGTTTAAAT
CTGTGGAGTT CACCTAATTG GTCACTAGAT TTTCTAGCCG CCAACTTGCA AAGTTCCACC
AGCCGTAATC CAGATGATGC CCCTAATACT TTGGATGAAG CTGTTCGTAA TGAATACCTA
ATGTCGATGG ATTCACTCTT TATTGGTGCC GGTTTCAGGG CTACACGCTA TTGGGATGAT
GACTATATTT TTCAGTATCG AATAGTAAGT GATTATTTTG ATGCTCAAGG TATTGCTAGC
TCTGCTCGGT TGGGGAAATC TTGGCAGGTT CGTAATTGGA ATTTTCATGC ATTAGCCAGT
ATTGAATACG CATCATCGAA GCTCAGTCGG CGCCTTTTTG GCGTTGAGAG CTCAGAAGCG
ACTGAGCTAT TTCCTGAGTA TCGCCCCGGT AGCGCTGTAA CATACGGTAT AGAGCTCGGT
GTAGCTTATC CACTGAGTGA GAAACTGGTA TTTCGAGCCA TGTATCGCCT CAATGTGCTC
TCCAAGGAAA TAACGAATAG TCCTTTTAAT CAAGCTGATT ATGGGTCGTT TTTTAACGCC
TCTATTAGCT ATGTGTTTTA G
 
Protein sequence
MNKMNVILLR SLLLGLLLTP NLVVASDIAT SVSRGGESRL ADGGYFELGA SVYGTNQLDI 
RQTEHESVQP SLLISGMYQY KGLFIEMIHE SQDGINLGLN LWSSPNWSLD FLAANLQSST
SRNPDDAPNT LDEAVRNEYL MSMDSLFIGA GFRATRYWDD DYIFQYRIVS DYFDAQGIAS
SARLGKSWQV RNWNFHALAS IEYASSKLSR RLFGVESSEA TELFPEYRPG SAVTYGIELG
VAYPLSEKLV FRAMYRLNVL SKEITNSPFN QADYGSFFNA SISYVF