Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3064 |
Symbol | |
ID | 4279968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3671294 |
End bp | 3672154 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135884 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_751741 |
Protein GI | 114564227 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TGAATGTAAT TTTACTTAGA AGTTTGTTAT TGGGACTGCT GTTAACGCCT AACTTAGTAG TGGCTTCAGA CATAGCGACT AGCGTGAGCC GCGGCGGAGA ATCACGCCTT GCTGATGGCG GTTACTTTGA GCTTGGAGCC AGTGTTTACG GTACCAATCA GTTAGATATT CGCCAAACTG AACATGAGTC AGTGCAGCCT TCTTTACTCA TCAGCGGCAT GTATCAATAC AAAGGTCTAT TTATAGAGAT GATACATGAA TCTCAAGATG GGATTAATTT GGGTTTAAAT CTGTGGAGTT CACCTAATTG GTCACTAGAT TTTCTAGCCG CCAACTTGCA AAGTTCCACC AGCCGTAATC CAGATGATGC CCCTAATACT TTGGATGAAG CTGTTCGTAA TGAATACCTA ATGTCGATGG ATTCACTCTT TATTGGTGCC GGTTTCAGGG CTACACGCTA TTGGGATGAT GACTATATTT TTCAGTATCG AATAGTAAGT GATTATTTTG ATGCTCAAGG TATTGCTAGC TCTGCTCGGT TGGGGAAATC TTGGCAGGTT CGTAATTGGA ATTTTCATGC ATTAGCCAGT ATTGAATACG CATCATCGAA GCTCAGTCGG CGCCTTTTTG GCGTTGAGAG CTCAGAAGCG ACTGAGCTAT TTCCTGAGTA TCGCCCCGGT AGCGCTGTAA CATACGGTAT AGAGCTCGGT GTAGCTTATC CACTGAGTGA GAAACTGGTA TTTCGAGCCA TGTATCGCCT CAATGTGCTC TCCAAGGAAA TAACGAATAG TCCTTTTAAT CAAGCTGATT ATGGGTCGTT TTTTAACGCC TCTATTAGCT ATGTGTTTTA G
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Protein sequence | MNKMNVILLR SLLLGLLLTP NLVVASDIAT SVSRGGESRL ADGGYFELGA SVYGTNQLDI RQTEHESVQP SLLISGMYQY KGLFIEMIHE SQDGINLGLN LWSSPNWSLD FLAANLQSST SRNPDDAPNT LDEAVRNEYL MSMDSLFIGA GFRATRYWDD DYIFQYRIVS DYFDAQGIAS SARLGKSWQV RNWNFHALAS IEYASSKLSR RLFGVESSEA TELFPEYRPG SAVTYGIELG VAYPLSEKLV FRAMYRLNVL SKEITNSPFN QADYGSFFNA SISYVF
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