| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3054 |
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| Symbol | |
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| ID | 4279958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3662426 |
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| End bp | 3662707 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638135874 |
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| Product | F0F1 ATP synthase subunit C |
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| Protein accession | YP_751731 |
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| Protein GI | 114564217 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
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| TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c
[TIGR03322] alternate F1F0 ATPase, F0 subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAGCA TAACAATTAT AGCAATGGTA TCGATTATCA CCGCAGGGTT TACCATCACC
ATCGGTGTTA TTGGACCTTC ACTCGGTGAA GGAAAGGCGG TAGCGACGGC TCTATCCTCT
TTGGCCCAGC AGCCAGATGC ATCAGCCACC ATTACCCGCA CACTGTTTGT TGGTTTGGCG
ATGATAGAAT CAACCGCGAT CTATTGTTTT GTGGTAACGA TGATACTGCT ATTTGCTAAC
CCTTTTTGGA ATTACGTGAT CGACCAAGCT GCGGGTATAT AG
|
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| Protein sequence | MDSITIIAMV SIITAGFTIT IGVIGPSLGE GKAVATALSS LAQQPDASAT ITRTLFVGLA
MIESTAIYCF VVTMILLFAN PFWNYVIDQA AGI
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