| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3034 |
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| Symbol | |
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| ID | 4279938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3640482 |
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| End bp | 3641231 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135854 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_751711 |
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| Protein GI | 114564197 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.377805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACCG TTTCCGCAAA TACAACAGCG GTATTAATTA CCGGTGCTAG TTCTGGCATT
GGTTTAGCTT TAGCGCAGCA TTACCTCGCT AAAGGCGTTG CCGTTATAGC TTGTGGTCGA
AATGCCCAAG CCTTGCAAGC CATAACTGGC GCCACTCCGC TAGCGTTTGA TATTACCGAC
AGCACTCAGG TGCAAGCCGC TGCAACCAAG CTTAAGCAGC TATTACACGA TAATCACTGG
CAGTTACAGC AGGTGATACT TAATGCTGGC AGCTGTGAAT ACATTGACGA TGCACTGCAT
TTTGACTCAG CGCTATTTGC CAGAGTCATC GATACCAATG TGGTTGCGAT GGGGTATTGT
CTGGAACATT TTTTACCTTT ACTGAGCCGT GGTGCACAGC TTGGATTAAT GAGTTCAAGT
GCCACTTATT TACCGTTCCC GCGTGCCGAA GCCTATGGTT CATCAAAAGC CGCTATTGGT
TATTTAGGCC GTAGTTTACG TGTTGACCTT GCACAACATG GTATTGGGGT TAGCGTGATT
TGTCCGGGGT TTGTTAAAAC CCCTTTAACG GCTAAAAATG ACTTTGCTAT GCCAATGCAA
ATCACAGCTC AGCAGGCGGC TCAGGCTATT TATAATGGTA TGCAGCGTCA ACGCCGTGAA
ATCCATTTCC CAACTAAATT TACTTGGTTA CTCAAATTAG CCTCTTTATT ACCAGAAAAG
TTATTAGTAT TTTTGCTGGC ACCTAAATAG
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| Protein sequence | MATVSANTTA VLITGASSGI GLALAQHYLA KGVAVIACGR NAQALQAITG ATPLAFDITD
STQVQAAATK LKQLLHDNHW QLQQVILNAG SCEYIDDALH FDSALFARVI DTNVVAMGYC
LEHFLPLLSR GAQLGLMSSS ATYLPFPRAE AYGSSKAAIG YLGRSLRVDL AQHGIGVSVI
CPGFVKTPLT AKNDFAMPMQ ITAQQAAQAI YNGMQRQRRE IHFPTKFTWL LKLASLLPEK
LLVFLLAPK
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