| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3023 |
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| Symbol | |
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| ID | 4279927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3631168 |
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| End bp | 3632667 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638135843 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_751700 |
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| Protein GI | 114564186 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0588426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAACA TCACTCATTT TGTCGATGGG CAACACACCC CAGCCAGCCA ACGTAATCAA
ACCATTTATG ATCCTGCTAC GGGGGAAACG CGTGGCCAAG TATCTTTGGC GAGTCACGAT
GAAGTGAGCT TAACGGTAGC GGTTGCCAAA AACGCTTATC AGACTTGGTC GCAAGTGACG
CCACTTAACC GTGCTCGGGT ATTATTCAAA TTTAAAGCGT TAGTAGAGCA AAATATTGAT
AAATTGGCCC GACTCATCAC TCTTGAACAT GGCAAAGTGT TAGATGATGC TAAAGGTGAA
ATTACCCGAG GACTTGAAGT TGTTGAGTTT GCTTGCGGCA TCCCGCATTT ACTCAAAGGA
GAGCATACTC AACAAGTGGG TGGTGGCGTT GATTCATGGT CTGTTAACCA ATCGTTGGGT
GTCGTCGCCG GTATTTCACC GTTTAATTTT CCTGTTATGG TGCCAATGTG GATGTTCCCT
ATCGCAATAG CCTGCGGTAA TACTTTTATC ATGAAGCCGT CTGAAAAAGA TCCAAGCGCA
GTGATGTTCA TTGCCGAATT ACTGACGCAA GCAGGCCTAC CAAATGGCGT GTTTAACGTG
ATTAATGGCG ATAAAGAAGC CGTTGATGCT TTATTAACTC ATCCCGATGT TCACGCAATT
AGTTTTGTTG GCTCAACCCC GATTGCCGAA TACATTTACA GCACCGCCTC TGCTCACGGT
AAACGCGTGC AAGCATTGGG CGGAGCTAAA AATCACATGC TATTAATGCC AGATGCTGAC
TTAGATCAAG CCGTCAATGC ATTAATGGGT GCAGCATATG GTAGTGCAGG TGAACGCTGT
ATGGCTATTT CGGTGGTATT AGCGGTCGGC GATGTGGGTG ACAAATTAGT CGAGGCATTA
TTACCGCAAA TTAGTGCCTT AAAAATTGGC AGCGGTATTA CCCCTGAAAT GGACATGGGA
CCGTTAATTT CGGCCCAGCA TTTAGCTAAA GTACGCGATT ATGTCGAAGT CGGTGTCAAA
GAAGGTGCAA CATTAGTCGT TGATGGCCGA GACATCAGTA TTCAAGACCA CCAGCAGGGT
TACTTTTTAG GTGCGTGCTT ATTTGACCAT GTGACTCCAC AGATGAGCAT TTACCAACAA
GAAATTTTTG GTCCTGTGTT AGCCATCGTC CGCGTCGACA ACTATGCCGA TGCATTGACG
CTGATTAACC AACACGAATT TGGTAATGGC ACCGCTATTT TTACTCAAAG TGGCCAAGTA
GCTCGTCACT TTTGTCACCA TGTTGAAGTG GGCATGGTTG GCGTTAATGT GCCGATTCCG
GTGCCAATGG CATTTCATAG CTTTGGCGGT TGGAAACGTT CGCTATTTGG GCCGCTGCAC
ATGCATGGAC CCGATGGCGT TCGCTTTTAT ACCAAGCGCA AAGCCATTAC CGCTCGCTGG
CCACAAGCTA AAAGCGACAC TAATGAACCT TCGGCATTTA TTATGCCGAC CATGAAATAA
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| Protein sequence | MLNITHFVDG QHTPASQRNQ TIYDPATGET RGQVSLASHD EVSLTVAVAK NAYQTWSQVT
PLNRARVLFK FKALVEQNID KLARLITLEH GKVLDDAKGE ITRGLEVVEF ACGIPHLLKG
EHTQQVGGGV DSWSVNQSLG VVAGISPFNF PVMVPMWMFP IAIACGNTFI MKPSEKDPSA
VMFIAELLTQ AGLPNGVFNV INGDKEAVDA LLTHPDVHAI SFVGSTPIAE YIYSTASAHG
KRVQALGGAK NHMLLMPDAD LDQAVNALMG AAYGSAGERC MAISVVLAVG DVGDKLVEAL
LPQISALKIG SGITPEMDMG PLISAQHLAK VRDYVEVGVK EGATLVVDGR DISIQDHQQG
YFLGACLFDH VTPQMSIYQQ EIFGPVLAIV RVDNYADALT LINQHEFGNG TAIFTQSGQV
ARHFCHHVEV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PQAKSDTNEP SAFIMPTMK
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