| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3009 |
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| Symbol | |
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| ID | 4279913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3613463 |
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| End bp | 3614563 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135829 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_751686 |
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| Protein GI | 114564172 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.274617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAT CAAACAAACT ATCCACATTG GCCTTAATTA CTGCGGGTGT GTTTTCAAGC
ACCGCTATTC AGGCTCAGGA AGTGGTTAAA ATGTACAACT GGTCGGATTA TATTGCCGAA
GATACCTTAG CCAATTTTGA GAAAGAAACC GGGATTCATG TCATTTATGA CGTGTTTGAC
AGTAATGAAG TACTTGAAGC GAAATTGCTT TCTGGCCATA GCGGTTATGA CATTGTTGTT
CCGTCGAATC ACTTTTTAGC TAAGCAAGTT AAAGCGGGGG CATTTCAAAA GCTCGATCGC
GCTAAGTTGA CTAATTATGC CAACTTAAAG CCTGATTTAA TGAAACAGCT ACAAAAAGCT
GATCCGGCCA ATGAGCACGC AATTCCGTAT TTATGGGGCA CTAACGGTAT TGGATATAAT
ATCGAAAAAG TGAAAGCCGT ATTGGGTGAA GATGCGCCAT TTGATTCTTT AGAGCTTATC
TTTAACCCTA AGTATGCTGA AAAGATTGGT TCATGTGGTT TCTCGATGCT TGATTCCGCC
GACGACATGT TGCCTCAAGC TCTGATTTAC TTAGGCTTAG ATCCAAACAG TAAAAATGCT
GCTGATTATG AAAAAGCCGC CGAAGTTCTG GAAAAAGTGC GTCCTTACGT TACTTACTTC
CATTCATCAC GCTATATTTC TGACTTAGCT AACGGTGATA TCTGTGTCGC GTTTGGTTTC
TCTGGTGACG TATTCCAGGC TGCTGCACGT GCTGATGAAG CCGGTAATGG CAATAAAATT
GGCTATTCTA TTCCAAAAGA AGGCGCCAAC TTATGGTTTG ATATGTTAGC TATCCCACAA
GATGCCACTA ATGTAGATAA CGCCCATAAA CTGATTAACT ATTTACTTCG CCCTGAAGTG
ATTGCACCTA TCAGTAACTA TGTTGCTTAC GCTAACCCTA ACGCTCCAGC ACAAGCCTTA
GTTGACGAAG CTATTCGTAA CGACCCAGCC ATTTACCCAC CACAGTCGGT AATTGATAAG
TTGTACATTG GTGATATTCG TCCATTAAAA ATTCAACGTG TAGTAACGCG TGCATGGACC
AAAGTGAAGT CAGGTCAATA A
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| Protein sequence | MKLSNKLSTL ALITAGVFSS TAIQAQEVVK MYNWSDYIAE DTLANFEKET GIHVIYDVFD
SNEVLEAKLL SGHSGYDIVV PSNHFLAKQV KAGAFQKLDR AKLTNYANLK PDLMKQLQKA
DPANEHAIPY LWGTNGIGYN IEKVKAVLGE DAPFDSLELI FNPKYAEKIG SCGFSMLDSA
DDMLPQALIY LGLDPNSKNA ADYEKAAEVL EKVRPYVTYF HSSRYISDLA NGDICVAFGF
SGDVFQAAAR ADEAGNGNKI GYSIPKEGAN LWFDMLAIPQ DATNVDNAHK LINYLLRPEV
IAPISNYVAY ANPNAPAQAL VDEAIRNDPA IYPPQSVIDK LYIGDIRPLK IQRVVTRAWT
KVKSGQ
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