Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3004 |
Symbol | |
ID | 4279908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3607436 |
End bp | 3608884 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638135824 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_751681 |
Protein GI | 114564167 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTTTAA ATGATCCAAG CTTATTGCAT GAACAATGTT ATATCGATGG CCTATGGGTG GGTGCTAACA GCGGCGAAAC GGTTGCTATA GCTAACCCTG CTACCCAAGA AATTATCGGT AATGTGCCTG TTATGGGCAA AACAGAAACC GAAGCAGCCA TTACTGCAGC CAATAATGCC TTACCGGCTT GGCGTGCGCT GACTGCCAAA GAGCGTAGCC AAAAGTTACG CCGTTGGTTT GAGTTAATGC ATGAAAATGC TGAAGACCTA GCGTTGATGA TGACGACAGA GCAAGGTAAA CCGCTGGCAG AATCAAGAGG TGAAGTAACC TATGCCGCCT CGTTTATCGA ATGGTTTGCT GAAGAAGCTA AGCGTATTTA TGGTGATACC ATTCCTGGCC ATCAAGCAGA TAAAAGACTG ACTGTTATTA AACAACCTGT TGGTGTGACT GCGGCGATTA CCCCGTGGAA TTTCCCTGCT GCGATGATCA CCCGTAAAGC GGGCCCTGCA CTAGCAGCCG GTTGTACTAT GGTCGTTAAA CCTGCGCCGC AAACTCCATT TACCGCATTA GCATTAGCTG AGCTTGCACA TCGTGCGGGC ATTCCTGCTG GTGTGTTTAG TGTTATTACT GGTGATGCGA TTGCGATTGG TAATGCTTTA TGTGAAAGCC CTATTGTGCG TAAATTATCT TTTACTGGTT CAACTGCGGT AGGAATTAAG TTAATGGAGC AATGTGCTCC AACACTTAAA AAACTGTCAT TGGAGCTAGG TGGTAATGCA CCGTTTATCG TTTTTAATGA TGCCGATATT GATGCCGCAG TTGATGGCGC AATGATTGCT AAATACCGTA ATGCCGGTCA AACCTGTGTG TGTGCCAACC GTATTTATGT CCAAGCAGGG GTGTATGAGC AATTCACCCA AAAATTTGCT GCAGCAGTGG CTAAATTAAG CGTCGGTAAT GGCGTGGATA CAGGGGTGAA TATCGGCCCG TTAATCAATG CTGATGCAGT GACTAAAGTA CAGCGTCATT TAGCCGATGC GGTTGCTAAA GGCGCAAGTA TCGTCACTGG CGGTAAAACA CATAGCTTAG GTGGCTTTTT CTTTGAACCT ACTATTTTAC GTGACGTTGA TAAATCGATG TTAGTTGCCA AAGAAGAGAC TTTTGGCCCA TTAGCACCGC TATTCAAATT CGACTCAGTA GATGATGTGA TTAAACAAGC TAATGACACT GAATTTGGCT TAGCCGCTTA CTTTTATGGC CGTGATATTT CGCTGGTTTA CAAAGTAGCA GAAGCACTTG AATACGGTAT GGTGGGCGTT AACACCGGAT TAATCTCGAC CGAAGTCGCG CCATTTGGTG GCATTAAATC GTCTGGATTA GGCCGCGAAG GCTCAAAATT TGGTATCGAA GAATACCTTG AAATGAAATA TATCTGCATG TCAGTTTAA
|
Protein sequence | MILNDPSLLH EQCYIDGLWV GANSGETVAI ANPATQEIIG NVPVMGKTET EAAITAANNA LPAWRALTAK ERSQKLRRWF ELMHENAEDL ALMMTTEQGK PLAESRGEVT YAASFIEWFA EEAKRIYGDT IPGHQADKRL TVIKQPVGVT AAITPWNFPA AMITRKAGPA LAAGCTMVVK PAPQTPFTAL ALAELAHRAG IPAGVFSVIT GDAIAIGNAL CESPIVRKLS FTGSTAVGIK LMEQCAPTLK KLSLELGGNA PFIVFNDADI DAAVDGAMIA KYRNAGQTCV CANRIYVQAG VYEQFTQKFA AAVAKLSVGN GVDTGVNIGP LINADAVTKV QRHLADAVAK GASIVTGGKT HSLGGFFFEP TILRDVDKSM LVAKEETFGP LAPLFKFDSV DDVIKQANDT EFGLAAYFYG RDISLVYKVA EALEYGMVGV NTGLISTEVA PFGGIKSSGL GREGSKFGIE EYLEMKYICM SV
|
| |