Gene Sfri_2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2994 
Symbol 
ID4279899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3593365 
End bp3593808 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content42% 
IMG OID638135814 
ProductGatB/Yqey domain-containing protein 
Protein accessionYP_751672 
Protein GI114564158 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0302156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAA CCGATCAGCT AAAAGACCAA ATGAAAGATG CCATGCGCGC TAAAGATAAA 
GTGCGCTTAG GAACAATTCG TATGGCACTT TCTGCCATCA AACAGATTGA AGTGGATACC
CGCGAAACTC TGACTGATGA ACAGACAATA GCTGTATTAA CCAAAATGGT TAAACAACGC
CGTGATTCGA TTGCTCAATA TGAAGCAGCG AATCGTCCGG AGTTGGCAGC TGTAGAAGCA
GATGAAATTC GAGTTATCGA AAATTTTCTG CCTACACCGC TAACAGAAGA TGAAGTAGCA
GCGATTATCG ATGCTACTAT TATTGATGTT GGTGCTGCAT CCATGGCGGA TATGGGTAAA
GTAATGGGAG CATTAAAAAC TAAAGTTCAA GGCCGTGCAG ATATGAGTGC CATTGGTACA
ATGATCCGCG CTAAGTTGAA GTAA
 
Protein sequence
MNLTDQLKDQ MKDAMRAKDK VRLGTIRMAL SAIKQIEVDT RETLTDEQTI AVLTKMVKQR 
RDSIAQYEAA NRPELAAVEA DEIRVIENFL PTPLTEDEVA AIIDATIIDV GAASMADMGK
VMGALKTKVQ GRADMSAIGT MIRAKLK