| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2992 |
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| Symbol | |
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| ID | 4279897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3591651 |
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| End bp | 3592667 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135812 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_751670 |
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| Protein GI | 114564156 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.2502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTTA TTGGTATTGA GACATCCTGT GACGAGACTG GAGTAGCAGT ATATGACGAT
AAGTTAGGCT TATTGTCGCA TGTGCTATAT AGCCAAGTTA AATTGCACGC CGATTATGGT
GGTGTTGTGC CTGAGCTTGC CTCTCGTGAT CATGTTCGCA AAATTGTGCC ATTGATTAAG
CAGGCTTTAT CAGAAGCTAA TTCAAGCCTA AATGATATCG ATGGTGTCGC GTATACCAAA
GGCCCTGGGC TAATTGGTGC ATTGCTTGTT GGTGCTTGTG TGGGACGTTC TTTAGCGTAT
GCATGGAATA AACCGGCAAT CGGTGTGCAT CATATGGAAG GGCATTTATT GGCACCCATG
CTGGAAGAAA ATGCGCCTGA ATTTCCTTTT TTAGCCTTGT TAGTGTCTGG CGGCCATTCA
ATGTTAGTGC AAGTTGAAGG CATTGGACGA TATCAAGTGT TAGGTGAATC TGTTGATGAT
GCTGCTGGCG AAGCTTTTGA TAAGACCGCC AAGCTCATGG GCTTAGATTA TCCTGGTGGC
CCTCGTTTAG CCAAATTAGC TCAAAAAGGC GTGCCTGCAG GATATAAATT TCCGCGGCCA
ATGACTGATA GACCAGGATT AGACTTTAGT TTTTCAGGAT TGAAAACATT TACAGCAAAT
ACTATCGCTG CAGAACCCAA TGATGATCAG ACTCGTGCCA ATATTGCCCG TGCATTTGAA
GAAGCTGTTG TTGATACTCT TGCGATAAAA TGCAAACGAG CCTTAAAGCA AACTGGTTAC
ACACGTTTGG TGATTGCCGG TGGTGTAAGC GCTAATACCC GTTTACGTGA GTCTTTGGCT
GAGATGATGA CCAAGTTAGG TGGTCAAGTG TATTATCCTC GCGGAGAGTT TTGTACCGAC
AATGGTGCCA TGATTGCTTA TGCTGGTTTA CAACGTTTAC GTGCAGGGCA TATTGAGGGG
CTAGAAGTTA AGGGGCAGCC TAGATGGCCT TTGGATACGT TGCCCGCAGT AGATTAA
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| Protein sequence | MRVIGIETSC DETGVAVYDD KLGLLSHVLY SQVKLHADYG GVVPELASRD HVRKIVPLIK
QALSEANSSL NDIDGVAYTK GPGLIGALLV GACVGRSLAY AWNKPAIGVH HMEGHLLAPM
LEENAPEFPF LALLVSGGHS MLVQVEGIGR YQVLGESVDD AAGEAFDKTA KLMGLDYPGG
PRLAKLAQKG VPAGYKFPRP MTDRPGLDFS FSGLKTFTAN TIAAEPNDDQ TRANIARAFE
EAVVDTLAIK CKRALKQTGY TRLVIAGGVS ANTRLRESLA EMMTKLGGQV YYPRGEFCTD
NGAMIAYAGL QRLRAGHIEG LEVKGQPRWP LDTLPAVD
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