Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2969 |
Symbol | |
ID | 4279874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3568352 |
End bp | 3568978 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638135789 |
Product | hypothetical protein |
Protein accession | YP_751647 |
Protein GI | 114564133 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.59212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGT GGATCTATTT TTTTGATTTA TGTGGTACCG CGGTATTTGC CCTTTCGGGA GCGTTAGCTG CGGGCAAGCA TCGTATGGAC CCCTTTGGCG TTATCGTGTT GGCTTCTGTT ACTGCAATTG GTGGCGGCAG TATTCGCGAT GCGTTAATAG GTGCCACGCC AGTTTTTTGG ATCCGCGATC CTAATTATAT GCTCGTCATT CTTGCGACCG TAATAACCTG CTTAGTGTTA GTGCGTAAAC CGCATAAATT ACCCCCACGC TCATTATCTA TTGCCGATGC ACTCGGTTTA GCACTATTTA CCGTAATTGG TGCAGAAAAA GCCTTATTGC TTGAATTATC TGGTATGGTC GCGGTAGTGA TGGGATTAAT AACCGGTGTC GGTGGTGGTA TTATCCGAGA TTTGTTATGT AGGCAAATTC CAATGGTGTT GCGAACGGAA ATTTACGCAA CCGCTTCCAT CGTTGGAGGG ATCTGTTATA CCTTAAGCAT ATTTGTCGGC ATGGATAGCA TGACATCGAT GTTGATCGCT ATGTTCAGCA CGCTAATCAT CCGTCTGAGT GCTATCCGCT GGCACTTATC TTTACCGGCT TTTGATTTGA AAACAAAGAG AATTTAA
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Protein sequence | MSQWIYFFDL CGTAVFALSG ALAAGKHRMD PFGVIVLASV TAIGGGSIRD ALIGATPVFW IRDPNYMLVI LATVITCLVL VRKPHKLPPR SLSIADALGL ALFTVIGAEK ALLLELSGMV AVVMGLITGV GGGIIRDLLC RQIPMVLRTE IYATASIVGG ICYTLSIFVG MDSMTSMLIA MFSTLIIRLS AIRWHLSLPA FDLKTKRI
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