| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2950 |
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| Symbol | |
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| ID | 4279855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3539532 |
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| End bp | 3540500 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135770 |
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| Product | putative radical SAM protein |
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| Protein accession | YP_751628 |
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| Protein GI | 114564114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
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| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.474173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTTTAG ATGATTACGT TAATACGTTT GGGGTGCATT GCAAACGTTT ATATGGCCAA
AGAATAAAAA AATTAACTAT AGATGCCCAA TTTACCTGCC CTAATCGAGA TGGCACGTTA
GGGGTGGGCG GTTGTACTTT TTGTAATGTC GCTTCATTTA GTGGCGAACA AGGCAGAGAA
CAACCTATTG CGCTGCAATT GACTGAAGGG AAAGTACGCG CCCTATCTGC AAAAAAATGC
ACAACATCTG TGAATGTTAA CTCTACTCCT ACTGCAAAAT ATATTGCTTA TTTTCAAGCT
TACACCAGTA CCTACGATGA GTATAAAGTG CTAAAGCAAA AGTATGATCA AGCACTTGAA
GATGCCGATA TTGTTGGGCT TCATATAGGC ACTCGTCCTG ACTGTGTGCC TGATGAAGTA
CTTGATTTAC TCGTTGAGTA TCAACAGCGA GGCATTGAGG TGTGGCTAGA ATTAGGCCTA
CAAACTGCCA ATAATCACAC GTTAAAGCGG ATTAATCGTG GTCACCAATT GTGTGAATAT
CGACAGACCG TTAAAAAAGC TCGCGCTAAA GGCATTAAGG TGTGTACCCA TTTGATATTA
GGTTTGCCAG GTGAAACATC TGCTGACTAT TTTAATAGCT TACAAACCGT ATTAGGAATC
GGTGTTGATG GACTAAAACT GCACCCTTTG CATATTGTAG AAGGCAGTAT TATGGCGAAA
CAGTGGCGCT ATCATCCTAT GCCGTTAATG AGCCTTGAAG AGTATGCCTC CGAGGCCGCA
AAACTTATTC GTCACACCCC AAAAGAGATT ATCTTTCATC GCGTGACTGC CTATGCCAAA
AAACCAATGT TACTCGCCCC TAATTGGTGT GCGTATAGAT GGGATGGTTT AGTGGCCATT
GTGGATGAAC TTAAAGAATA CGGTGGGCAA GGCAGTGCGT TAATGTTTAG CCAAAGTAAA
ACAGCCTAG
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| Protein sequence | MGLDDYVNTF GVHCKRLYGQ RIKKLTIDAQ FTCPNRDGTL GVGGCTFCNV ASFSGEQGRE
QPIALQLTEG KVRALSAKKC TTSVNVNSTP TAKYIAYFQA YTSTYDEYKV LKQKYDQALE
DADIVGLHIG TRPDCVPDEV LDLLVEYQQR GIEVWLELGL QTANNHTLKR INRGHQLCEY
RQTVKKARAK GIKVCTHLIL GLPGETSADY FNSLQTVLGI GVDGLKLHPL HIVEGSIMAK
QWRYHPMPLM SLEEYASEAA KLIRHTPKEI IFHRVTAYAK KPMLLAPNWC AYRWDGLVAI
VDELKEYGGQ GSALMFSQSK TA
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