Gene Sfri_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2928 
Symbolera 
ID4279833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3516559 
End bp3517563 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content41% 
IMG OID638135748 
ProductGTP-binding protein Era 
Protein accessionYP_751606 
Protein GI114564092 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAA AAACAGACTT GCCAGCAGGT GATAACCAAG AGCCTAGCTT AGATGAACTG 
CTGGCAAGGA TGAACCAAGC AGCACCAACC GCCACAGCCA AATACGATGT AACTTATTGT
GGCATGGTGG CTATTGTCGG TCGTCCCAAT GTGGGTAAAT CAACACTTTT GAACAAGTTA
CTTGGTCAAA AGGTGAGTAT TACCTCAAAA AAACCGCAAA CAACTCGTCA CCGTATCATG
GGTATTCATA CAGATGGCCC AAGTCAGATT ATATTTATTG ATACCCCAGG TCTGCACATT
GAAGAAAAGC GTGCGATAAA CCGTTTGATG AACCGTGCAG CTGCCAGTTC ATTAGCTGAT
GTTGCTATGG TTATTTTTGT TGTTGATGGT ATGACGTGGA CTGCCGATGA TGAGATGGTG
CTCCAAAAAA TTCAACATCG TAATGATGAT CGAAAAATCA TTTTAGCTAT TAACAAAGTT
GATAACATTA AAGATAAGGA ATCATTGTTC CCTTATTTAA CTGAATTGGC TAAAAAGTTT
GATTTTGATG AGATTTTGCC AATATCAGCC AGTAAAGGCA CCAATGTGCA GCGCATTTTG
GATATGGCAC GTGAATCATT ACCTGAAGCC CCATTTTATT TCCCTGAAGA TTACGTGACC
GATCGCTCAC AACGCTTTAT GGCATCTGAA ATTGTCCGTG AAAAACTGAT GCGCTTCCTT
GGGGATGAAC TTCCTTACGA CGCAACGGTT GAGATTGAAC AGTTTAAAAT GATGGAAAAT
GGCGTTTATC AAATTAATGC GTTAATTCTG GTTGAACGTG AAGGCCAAAA ACGTATGGTA
ATTGGCAATA AAGGTGAGCG AATTCGAACC ATTGCAACGC AATCTCGTCT AGACATGGAA
ACCTTATTTG AGAATAAAGT ATTTCTTGAA GTGTGGGTGA AAGTGAAATC CGGTTGGGCT
GATGATGAAC GTGCATTGAG AAGTTTAGGC TATGGCGAAA GCTAA
 
Protein sequence
MTKKTDLPAG DNQEPSLDEL LARMNQAAPT ATAKYDVTYC GMVAIVGRPN VGKSTLLNKL 
LGQKVSITSK KPQTTRHRIM GIHTDGPSQI IFIDTPGLHI EEKRAINRLM NRAAASSLAD
VAMVIFVVDG MTWTADDEMV LQKIQHRNDD RKIILAINKV DNIKDKESLF PYLTELAKKF
DFDEILPISA SKGTNVQRIL DMARESLPEA PFYFPEDYVT DRSQRFMASE IVREKLMRFL
GDELPYDATV EIEQFKMMEN GVYQINALIL VEREGQKRMV IGNKGERIRT IATQSRLDME
TLFENKVFLE VWVKVKSGWA DDERALRSLG YGES