| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2927 |
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| Symbol | |
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| ID | 4279832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3515800 |
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| End bp | 3516522 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135747 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_751605 |
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| Protein GI | 114564091 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACTA TGAAACGTGG CTATGTGCTT CATCATCGAC AATTTCGTGA ATCGAGCGTG
ATCGTTAATT TGCTAGTAGA GGGTGTTGGA CGTGTTGATG CCATTACTCG AGTCGGTTCT
GGTAAACGGT CAATTAAAAG TATCTTACAA CCTTTTCAAC CGCTAATTAT CCAATTTAGT
GCCAAGTCCG AAGCCAGAAA TTTAGGGTTG AAAAATATTA CCCAAATTGA ATCCGCTGCA
CCTGCTATGC CGTTGAGCGG TAATAGTCTT TATTCTGGTT TTTACTTAAA CGAAATATTG
GTTCGCCTAT TATCGGTAGA TCACCAAGCT GAAGGTCTCT TTCTCGATTA TCATCGTGCG
CTACTGGCGT TAGCGAAACA GTTTTGTTCA AGCCACCTGC GTTATTTTGA AATGGCATTG
TTACTCGAGT TAGGTGCATT GCCGTCTCTT GCTTATGACA CCCAAGGTGA CTCGTTAGAT
AACCGTTGTC ACTATCGGTT TATTGCCGAG AGTGGTTTTA TCCCTGTAGC AACAACTCAA
GAAAGCCCTT TTTCTCATGG CAAAGGCTGC TTATCTGGAG CAATGTTGCT AGCATTGGCA
TCACAAAACC TGCAACCTGA ACAGTTTAAT CAAGCCAAAG GGTTAATGCG TTATTTACTC
ACACCATTGT TAGGTAATAA GCCGTTATTA AGTAGGCAGT TATTCAGTAA CAAAGCGGAT
TAG
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| Protein sequence | MATMKRGYVL HHRQFRESSV IVNLLVEGVG RVDAITRVGS GKRSIKSILQ PFQPLIIQFS
AKSEARNLGL KNITQIESAA PAMPLSGNSL YSGFYLNEIL VRLLSVDHQA EGLFLDYHRA
LLALAKQFCS SHLRYFEMAL LLELGALPSL AYDTQGDSLD NRCHYRFIAE SGFIPVATTQ
ESPFSHGKGC LSGAMLLALA SQNLQPEQFN QAKGLMRYLL TPLLGNKPLL SRQLFSNKAD
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