Gene Sfri_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2906 
SymbolthrA 
ID4279811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3494772 
End bp3497237 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content42% 
IMG OID638135726 
Productbifunctional aspartokinase I/homeserine dehydrogenase I 
Protein accessionYP_751584 
Protein GI114564070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA TGAAATTTGG TGGAACATCG TTGGCGAACT GGTCTCGTTT TTCGATGGCG 
GCAGACATTA TTGCTGATAC GGCTTCGACA GAATCTGTTG CTACGGTACT TTCTGCTCCT
GCAACAGTAA CCAATGCACT GTTAGAAATG GTTGATATCG CTGTTAATCA ACAAGACTAT
CAGCCAGTGT TAGACCATAT CAATGGTGTA TTTAGTGGTT TGTTTTCTGA TGCCACTTCA
CTTATTACAG CCGTTCAACA TAAATTATTG GTCGAGAAAT TAGCTGCGCA AATGCAGGTT
TGGAAAGATA AGTTGTATGG AATCAGGTTA TTGGGAGAAT GCCCTGATAG TGTTCGTGCT
GAATTAGTGG TGACCGGAGA GCGCTTATCA GCAGCATTAA TGGAACAAGT AATGTTGGCG
AAAGACATTA CTTCAGCACA ATTAGATCCA GTCGCGTTAT TTTTAGCTCA TGGTCAGCCG
TTGGAGTCTG TAGTCGATAT TGCGGTTAGC AAGCCTCGCT TTACCTTATT GCCGCTTGAT
CAATACCGAG TCTGGGTGAT GCCTGGATTT ACTGCCGCAG ATGCTCAAGG CAAAGTCGTA
ACATTAGGTC GTAATGGTTC TGATTATTCT GCTGCAGTGT TGGCCGCTTG TTTAGACGCT
TCTAGTTGTG AAATTTGGAC TGATGTGGAT GGAGTTTATA ACACTGATCC ACGTGTTGTG
GCCGACGCTA AATTATTGTC ACAATTAAGC TATCAAGAAG CGATGGAACT CTCATATTTT
GGCGCCAAAG TATTGCACCC TAAAACGATT GCGCCAATTG CTCAATATCA AATCCCTTGT
TATATCAAAA ACAGTTTTAA TCCGTCAGCT CCCGGTACAT TGGTGTCTAA TGATGATGAT
AAAACAGGGC TACAAGTTAA AGCGATTTCA AATTTAGACA ATCAAACCAT GTTTAACGTC
TCCGGCCCAG GAATGAAAGG CATGGTCGGC ATGGCAAGCA GGACTTTAGC GGTTATCTCT
CGCAGTGGTA TCTCGGTTTC TCTTATTACC CAAAGCTCAT CTGAATACAG TATCAGTTTT
TGTGTCTCTA CCTCTCAAGC AAACAAAGCT AAATGGGCAC TAGAACAAGA ATTTGAGCTT
GAATTAAAAA GTGAATTACT TGAGCCGATT GAATTGCGTC AAGATTTGGC GATAGTGTCT
TTGATTGGTG ATGGTATGAA AACCCATAAG GGCGTAGCGG CTAAATTTTT TACAGCACTA
GCTAAAGCCA GTGTCAATAT CATTGCTATT GCTCAGGGTT CATCAGAGCG ATCAATTTCT
ACCGTTATTC AACAGAAAAA AACCAAGCAT GCCATTGGTG CATGTCATCA AGCATTTTTC
GATGTTCAGC AGTATTTAGA TGTGTTTTTA GTCGGTAGCG GTAATGTGGG TGCTGGATTA
CTCGATCAAA TCAAGCAGCA GAGTGCGATG TTAAAAGAAC AGCACATTAG TATTCGTGTA
TGTGGGATCG CTAATTCGAG CCAAATGTTG TTGAATAGTG AAGGTATTGA ACTTGGCGAG
TGGCAGTCAT TACTGGCCGA GAAGGGCCAA GCATATGATT TAGCTAAGCT ACTTGAGTGG
GGGCAAGAGC AGCAATTACT TAATCCTGTA CTGGTTGATT GTACATCAAG CGAGTTAGTG
TCAGACCGTT ACCTTGATGT GATGAATGCC GGTTTCCATG TTGTTACTCC AAACAAAAAA
TCGAATACTC GTGATTATGC TTACTATCAA GCATTGCGTA AAACGGCTTT AACTCAGCGT
CGACAATTTT TGTATGAAAC GACGGTAGGT GCTGGTTTAC CGGTTATCGA TAACTTGAAA
AAACTCATGT ATGCCGGTGA TAAGCTACAT AAGTTTAATG GTATTTTGTC TGGGTCATTA
TCCTACATTT TTGGTATGTT AGATGACGGT ATGAGCTTAT CGCAAGCGAC TGCGATTGCG
CGTGACAAGT GTTTTACTGA ACCCGATCCT CGTGATGATT TAAGTGGTAT GGATGTCGCT
CGTAAAGTAC TCATTCTTGC TCGTGAAGTT GGCCTGCCAT TAGAGCTTGA AGACATTAAT
ATTGAATCTG TATTGCCTGC TGATTTTGAC GACTCAGGCG ATGTTAATCA ATTTATGGCG
AATCTTGCTT CATTAGATGA CCTTATCTCT GCTCGAGTCG CGGCGGCTAA AACCGAAGGT
AAAGTGCTGC GTTATGTTGG CCAAATTGAA GACGGGCAAT GCCATGTCAG AATTGTTGAA
GTCGATGCAA CTGATCCATT ATACAGTGTT AAAGGTGGCG AGAATGCGCT GGCATTTTAT
AGCCGTTATT ATCAACCAAT TCCTTTTGTA TTAAGAGGCT ATGGTGCTGG TACCGATGTT
ACTGCTGCCG GGGCCTTTGC TGACGTATTA AGAACCTTAA ACTGGACTCG TGAGGTTGGG
TTATGA
 
Protein sequence
MKVMKFGGTS LANWSRFSMA ADIIADTAST ESVATVLSAP ATVTNALLEM VDIAVNQQDY 
QPVLDHINGV FSGLFSDATS LITAVQHKLL VEKLAAQMQV WKDKLYGIRL LGECPDSVRA
ELVVTGERLS AALMEQVMLA KDITSAQLDP VALFLAHGQP LESVVDIAVS KPRFTLLPLD
QYRVWVMPGF TAADAQGKVV TLGRNGSDYS AAVLAACLDA SSCEIWTDVD GVYNTDPRVV
ADAKLLSQLS YQEAMELSYF GAKVLHPKTI APIAQYQIPC YIKNSFNPSA PGTLVSNDDD
KTGLQVKAIS NLDNQTMFNV SGPGMKGMVG MASRTLAVIS RSGISVSLIT QSSSEYSISF
CVSTSQANKA KWALEQEFEL ELKSELLEPI ELRQDLAIVS LIGDGMKTHK GVAAKFFTAL
AKASVNIIAI AQGSSERSIS TVIQQKKTKH AIGACHQAFF DVQQYLDVFL VGSGNVGAGL
LDQIKQQSAM LKEQHISIRV CGIANSSQML LNSEGIELGE WQSLLAEKGQ AYDLAKLLEW
GQEQQLLNPV LVDCTSSELV SDRYLDVMNA GFHVVTPNKK SNTRDYAYYQ ALRKTALTQR
RQFLYETTVG AGLPVIDNLK KLMYAGDKLH KFNGILSGSL SYIFGMLDDG MSLSQATAIA
RDKCFTEPDP RDDLSGMDVA RKVLILAREV GLPLELEDIN IESVLPADFD DSGDVNQFMA
NLASLDDLIS ARVAAAKTEG KVLRYVGQIE DGQCHVRIVE VDATDPLYSV KGGENALAFY
SRYYQPIPFV LRGYGAGTDV TAAGAFADVL RTLNWTREVG L