Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2906 |
Symbol | thrA |
ID | 4279811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3494772 |
End bp | 3497237 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135726 |
Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
Protein accession | YP_751584 |
Protein GI | 114564070 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA TGAAATTTGG TGGAACATCG TTGGCGAACT GGTCTCGTTT TTCGATGGCG GCAGACATTA TTGCTGATAC GGCTTCGACA GAATCTGTTG CTACGGTACT TTCTGCTCCT GCAACAGTAA CCAATGCACT GTTAGAAATG GTTGATATCG CTGTTAATCA ACAAGACTAT CAGCCAGTGT TAGACCATAT CAATGGTGTA TTTAGTGGTT TGTTTTCTGA TGCCACTTCA CTTATTACAG CCGTTCAACA TAAATTATTG GTCGAGAAAT TAGCTGCGCA AATGCAGGTT TGGAAAGATA AGTTGTATGG AATCAGGTTA TTGGGAGAAT GCCCTGATAG TGTTCGTGCT GAATTAGTGG TGACCGGAGA GCGCTTATCA GCAGCATTAA TGGAACAAGT AATGTTGGCG AAAGACATTA CTTCAGCACA ATTAGATCCA GTCGCGTTAT TTTTAGCTCA TGGTCAGCCG TTGGAGTCTG TAGTCGATAT TGCGGTTAGC AAGCCTCGCT TTACCTTATT GCCGCTTGAT CAATACCGAG TCTGGGTGAT GCCTGGATTT ACTGCCGCAG ATGCTCAAGG CAAAGTCGTA ACATTAGGTC GTAATGGTTC TGATTATTCT GCTGCAGTGT TGGCCGCTTG TTTAGACGCT TCTAGTTGTG AAATTTGGAC TGATGTGGAT GGAGTTTATA ACACTGATCC ACGTGTTGTG GCCGACGCTA AATTATTGTC ACAATTAAGC TATCAAGAAG CGATGGAACT CTCATATTTT GGCGCCAAAG TATTGCACCC TAAAACGATT GCGCCAATTG CTCAATATCA AATCCCTTGT TATATCAAAA ACAGTTTTAA TCCGTCAGCT CCCGGTACAT TGGTGTCTAA TGATGATGAT AAAACAGGGC TACAAGTTAA AGCGATTTCA AATTTAGACA ATCAAACCAT GTTTAACGTC TCCGGCCCAG GAATGAAAGG CATGGTCGGC ATGGCAAGCA GGACTTTAGC GGTTATCTCT CGCAGTGGTA TCTCGGTTTC TCTTATTACC CAAAGCTCAT CTGAATACAG TATCAGTTTT TGTGTCTCTA CCTCTCAAGC AAACAAAGCT AAATGGGCAC TAGAACAAGA ATTTGAGCTT GAATTAAAAA GTGAATTACT TGAGCCGATT GAATTGCGTC AAGATTTGGC GATAGTGTCT TTGATTGGTG ATGGTATGAA AACCCATAAG GGCGTAGCGG CTAAATTTTT TACAGCACTA GCTAAAGCCA GTGTCAATAT CATTGCTATT GCTCAGGGTT CATCAGAGCG ATCAATTTCT ACCGTTATTC AACAGAAAAA AACCAAGCAT GCCATTGGTG CATGTCATCA AGCATTTTTC GATGTTCAGC AGTATTTAGA TGTGTTTTTA GTCGGTAGCG GTAATGTGGG TGCTGGATTA CTCGATCAAA TCAAGCAGCA GAGTGCGATG TTAAAAGAAC AGCACATTAG TATTCGTGTA TGTGGGATCG CTAATTCGAG CCAAATGTTG TTGAATAGTG AAGGTATTGA ACTTGGCGAG TGGCAGTCAT TACTGGCCGA GAAGGGCCAA GCATATGATT TAGCTAAGCT ACTTGAGTGG GGGCAAGAGC AGCAATTACT TAATCCTGTA CTGGTTGATT GTACATCAAG CGAGTTAGTG TCAGACCGTT ACCTTGATGT GATGAATGCC GGTTTCCATG TTGTTACTCC AAACAAAAAA TCGAATACTC GTGATTATGC TTACTATCAA GCATTGCGTA AAACGGCTTT AACTCAGCGT CGACAATTTT TGTATGAAAC GACGGTAGGT GCTGGTTTAC CGGTTATCGA TAACTTGAAA AAACTCATGT ATGCCGGTGA TAAGCTACAT AAGTTTAATG GTATTTTGTC TGGGTCATTA TCCTACATTT TTGGTATGTT AGATGACGGT ATGAGCTTAT CGCAAGCGAC TGCGATTGCG CGTGACAAGT GTTTTACTGA ACCCGATCCT CGTGATGATT TAAGTGGTAT GGATGTCGCT CGTAAAGTAC TCATTCTTGC TCGTGAAGTT GGCCTGCCAT TAGAGCTTGA AGACATTAAT ATTGAATCTG TATTGCCTGC TGATTTTGAC GACTCAGGCG ATGTTAATCA ATTTATGGCG AATCTTGCTT CATTAGATGA CCTTATCTCT GCTCGAGTCG CGGCGGCTAA AACCGAAGGT AAAGTGCTGC GTTATGTTGG CCAAATTGAA GACGGGCAAT GCCATGTCAG AATTGTTGAA GTCGATGCAA CTGATCCATT ATACAGTGTT AAAGGTGGCG AGAATGCGCT GGCATTTTAT AGCCGTTATT ATCAACCAAT TCCTTTTGTA TTAAGAGGCT ATGGTGCTGG TACCGATGTT ACTGCTGCCG GGGCCTTTGC TGACGTATTA AGAACCTTAA ACTGGACTCG TGAGGTTGGG TTATGA
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Protein sequence | MKVMKFGGTS LANWSRFSMA ADIIADTAST ESVATVLSAP ATVTNALLEM VDIAVNQQDY QPVLDHINGV FSGLFSDATS LITAVQHKLL VEKLAAQMQV WKDKLYGIRL LGECPDSVRA ELVVTGERLS AALMEQVMLA KDITSAQLDP VALFLAHGQP LESVVDIAVS KPRFTLLPLD QYRVWVMPGF TAADAQGKVV TLGRNGSDYS AAVLAACLDA SSCEIWTDVD GVYNTDPRVV ADAKLLSQLS YQEAMELSYF GAKVLHPKTI APIAQYQIPC YIKNSFNPSA PGTLVSNDDD KTGLQVKAIS NLDNQTMFNV SGPGMKGMVG MASRTLAVIS RSGISVSLIT QSSSEYSISF CVSTSQANKA KWALEQEFEL ELKSELLEPI ELRQDLAIVS LIGDGMKTHK GVAAKFFTAL AKASVNIIAI AQGSSERSIS TVIQQKKTKH AIGACHQAFF DVQQYLDVFL VGSGNVGAGL LDQIKQQSAM LKEQHISIRV CGIANSSQML LNSEGIELGE WQSLLAEKGQ AYDLAKLLEW GQEQQLLNPV LVDCTSSELV SDRYLDVMNA GFHVVTPNKK SNTRDYAYYQ ALRKTALTQR RQFLYETTVG AGLPVIDNLK KLMYAGDKLH KFNGILSGSL SYIFGMLDDG MSLSQATAIA RDKCFTEPDP RDDLSGMDVA RKVLILAREV GLPLELEDIN IESVLPADFD DSGDVNQFMA NLASLDDLIS ARVAAAKTEG KVLRYVGQIE DGQCHVRIVE VDATDPLYSV KGGENALAFY SRYYQPIPFV LRGYGAGTDV TAAGAFADVL RTLNWTREVG L
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