| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2899 |
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| Symbol | |
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| ID | 4279804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3487233 |
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| End bp | 3488363 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135719 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_751577 |
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| Protein GI | 114564063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAA ATATGATGAA GAACACATTA AAAGTAGTAT TACTCACCTC TATGTTGCCT
TTCGCTGCAT CAGCTGCACA AGAATTAACA CCTTGGTACG TTGGTGGTGG TTTAGGCGTA
AACAACTATG AACCTAGCTG TGACCAAAAA ACCATGAAAG TATGTGGTGA AGATGACCCA
TATGCTTGGG ATGTTTTTGG TGGTTATTTA TTTAACGAAT ATGTTGGTAT TGAACTAGGC
TACCGTGACC TTGGTCGTGC TGAGTGGACT GATTATTCTA ACAAGCGCAA TGATGTTGGT
GCTCGTGGAA TGTCATTAGG TTTTGTTGGT TTTTACCCAC TTGCAGACAA GTGGAGCTTA
TCAGCTGAAG CTGGTGCGTT TAACTACCTA ATCTCGAACA AAAAAGAATA CAACACTGAA
TATTACAGTG ATAGCGGTAT TGCACCATAC TTAGGTGCTG GTATTGGTTA TAACTTTACT
GACAATTTAA AGTTACAAGC TAAATACCGT CGTTATGAAA ATCTTGACGA AGAAAAGTGG
AATACACTTT CAATGGAAAG TAACTATTGG GGTCTTGAGC TAAGCTACCG TTTTGGTACT
AGTGCTCCAG CTCCAGTTGC TGCTCCAGTT GTTGTTGCAC CAGTTGTTGT TCCACTTGGT
GATGATGATA AAGATGGCGT AACAAACAAC ATCGACAAAT GTCCAGACAC ACCATCAACT
CACAAAGTTG ATGCTACTGG TTGTAGCGTT TATGAAAACG TTACAACTAA GTATGACTTA
GGTGGTATTT TATTTGCTAA TGATTCAGCT GAAATCCGTG CTGGTTCGTT TGCTGATTTA
GAAAAACTTG CTGACCACTT AACTAAATAC CCACAACACA CTGTATCTGT TCAAGGCCAT
GCGTCTAACG TAGGTAAAGC AGAATACAAC ATGAAGCTTT CTGAGCGTCG TGCGGTAGCA
GTTGCAAGTG CACTAAACAA AAAATATGGC ATTAGCATCA GCCGTATCAG TTCTGTTGGT
TACGGTGTAA CTAAACCAGT TATGCAAGGT AGCTCAGCTG AAGCTAACCG TGTTAACCGT
CGTATCGAAG CTATCGTGAC GGGTACTGAA AAGCGCGTAG TATTACGTTA A
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| Protein sequence | MDVNMMKNTL KVVLLTSMLP FAASAAQELT PWYVGGGLGV NNYEPSCDQK TMKVCGEDDP
YAWDVFGGYL FNEYVGIELG YRDLGRAEWT DYSNKRNDVG ARGMSLGFVG FYPLADKWSL
SAEAGAFNYL ISNKKEYNTE YYSDSGIAPY LGAGIGYNFT DNLKLQAKYR RYENLDEEKW
NTLSMESNYW GLELSYRFGT SAPAPVAAPV VVAPVVVPLG DDDKDGVTNN IDKCPDTPST
HKVDATGCSV YENVTTKYDL GGILFANDSA EIRAGSFADL EKLADHLTKY PQHTVSVQGH
ASNVGKAEYN MKLSERRAVA VASALNKKYG ISISRISSVG YGVTKPVMQG SSAEANRVNR
RIEAIVTGTE KRVVLR
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