| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2873 |
|---|
| Symbol | |
|---|
| ID | 4279778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 3456055 |
|---|
| End bp | 3457128 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638135691 |
|---|
| Product | A/G-specific adenine glycosylase |
|---|
| Protein accession | YP_751551 |
|---|
| Protein GI | 114564037 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TGACTCCATT TTCTGAGCGT ATCATCGCTT GGTATGACCT TCATGGTCGT
AAATCGCTGC CATGGCAGAT CAATAAAACA CCTTATCGAG TTTGGGTGTC GGAGATCATG
CTCCAGCAAA CTCAAGTCGC GACGGTTATT CCTTATTATG AAAAGTTTAT GGCGCGTTTC
CCTAGCGTTA TAGATCTTGC TAATGCTCAT CAAGATGAAG TGCTACATTT ATGGACTGGC
CTAGGTTATT ACGCTAGAGC GCGTAATCTA CATAAAGCGG CTCAGCATAT TCGTGATGCT
TTAAATGGAC AATTTCCCAC ACAGTTTGAT GATGTGGTTG CGTTATCTGG AATAGGTAAA
TCGACTGCTG GCGCAGTGTT ATCCTTATCG CTCGGTCAAC ACCACTCAAT TTTAGACGGT
AATGTAAAAC GAGTTTTGGC ACGACATGGT GCTATTGAAG GTTGGCCGGG ACAAAAACAC
GTTGAACAAC AATTGTGGCA ATTAACCGAT GCGTTAACAC CAGCCAAAAA CGTTGAAAAA
TTTAACCAAG CTATGATGGA TATTGGTTCA AGTGTTTGTA CCCGCAGTAA ACCTAATTGT
GCTGCCTGCC CTGTAGCAAT TGATTGTGTG GCTCAACAGA CAGGTCATCA AAGTTTATAT
CCTGGTAAAA AACCTAAAAA AGTAACGCCA GAAAAATCAG CGTTTATGGT GGTTTTAGTC
GATAACAGCG AAGATTCAGT AAAAGTTCAG CTTATTCAGC GTCCACCAGC TGGTATATGG
GGAGGATTAT GGTGTTTTCC ACAATTTGAA CATCAAGCAG AATTAGATAA TTATTTAACG
CTGCATAATT TGACAGAATC AGAGCAAGGG CTTGCAGGGT TTAGGCATAC ATTTAGTCAC
TTCCACCTTG ATATTCAACC AGTGCTAGTT GAACTATCTG TCGATCAAGC AACAGGCATC
ATGGAACAAA CCTCGGCTCT CTGGTATAAC ATAGAGCAAC CTGCGAAAGT CGGGTTGGCA
GCCGCTACAG AACGTATTTT GGCTAATTTA GCCGTACTTT TCGCGACACA TTAG
|
|---|
| Protein sequence | MKNLTPFSER IIAWYDLHGR KSLPWQINKT PYRVWVSEIM LQQTQVATVI PYYEKFMARF
PSVIDLANAH QDEVLHLWTG LGYYARARNL HKAAQHIRDA LNGQFPTQFD DVVALSGIGK
STAGAVLSLS LGQHHSILDG NVKRVLARHG AIEGWPGQKH VEQQLWQLTD ALTPAKNVEK
FNQAMMDIGS SVCTRSKPNC AACPVAIDCV AQQTGHQSLY PGKKPKKVTP EKSAFMVVLV
DNSEDSVKVQ LIQRPPAGIW GGLWCFPQFE HQAELDNYLT LHNLTESEQG LAGFRHTFSH
FHLDIQPVLV ELSVDQATGI MEQTSALWYN IEQPAKVGLA AATERILANL AVLFATH
|
|---|
| |