| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2872 |
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| Symbol | trmB |
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| ID | 4279777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3455089 |
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| End bp | 3455805 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135690 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_751550 |
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| Protein GI | 114564036 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACG TTACCACAGC TGAATTTAAC GAAGACGGTA AGTATATTCG TAAAATCAGA
AGTTTTGTTT TACGCGAAGG CCGTTTAACC AAAGGTCAAT CTCAAGCAAT TGAAGCACAT
TGGCCAGCAA TGGGACTTGA TTATACTCCA CAAGCGTTGG AGTTAACTCA AGTGTTTGGT
CGCGATGCTG ATACCGTATT AGAAATCGGT TTTGGTATGG GTGCATCATT AGTGCAAATG
GCAAAAGCTG CCCCAGAACA AAACTTTATT GGCATAGAAG TGCATAAGCC AGGCATTGGT
ACGTGTCTTT CTGAGGCCGG TGCTGCTGAA GTGACTAACT TACGTGTATA TCATCACGAT
GCAATGGAAG TGCTAGAGCA CAGCATTGTT GATGGTTCAC TTGAGCGCGT TCAATTGTTT
TTCCCTGATC CATGGCATAA AAAACGTCAT CATAAGCGCC GGATTGTGCA AGCCGAGTTT
GTACAACTTA TCCGCCGTAA GCTTAAAATT GGTGGTGTGT TTCACATGGC AACCGATTGG
GAGAATTACA GCGAGCATAT GTTAGAAATA ATGAATGCCG CAGAAGGTTA TAAAAATCAA
TCAACAACTG GTACAGTTGT CGAACGTCCA GAGCATCGTC CACTTACCAA GTTTGAGGCA
AGAGGCCACA GACTCGGTCA CGGCGTATGG GATATCATGT TTGAGCGTAC TGCTTAA
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| Protein sequence | MSDVTTAEFN EDGKYIRKIR SFVLREGRLT KGQSQAIEAH WPAMGLDYTP QALELTQVFG
RDADTVLEIG FGMGASLVQM AKAAPEQNFI GIEVHKPGIG TCLSEAGAAE VTNLRVYHHD
AMEVLEHSIV DGSLERVQLF FPDPWHKKRH HKRRIVQAEF VQLIRRKLKI GGVFHMATDW
ENYSEHMLEI MNAAEGYKNQ STTGTVVERP EHRPLTKFEA RGHRLGHGVW DIMFERTA
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