Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2867 |
Symbol | |
ID | 4279772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3449102 |
End bp | 3450958 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135685 |
Product | hypothetical protein |
Protein accession | YP_751545 |
Protein GI | 114564031 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000160677 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTA AAACTAAAAC AACTCTCGTT GCTGTCGCGT TATCAAGTTT ATTAAGCGCT TCAGCCATTG CGAACTTGCA CAACATGCCG CAATTGAGCC AACAAGAAAG TACAGCGACA TCAAGCCAAC AAACCGAGTC AGAAAAAGCC AACGCATTGT TTGAAGCCAT TTTTATGGAA AATGTGATGG CAAATCCAGT CAATCAAACT TACCTTGGTA TAAAACAAGA TTACGGCAAG TGGAATGACT TGTCTGACGC TGCTGCCGAT GCAGATTTAG CCCGCAGTAA ACAGCAACTC ACAAGATTGA CGAGCCTTGA TGCCAACAAA CTAAATGAAC AAGCGGCCCT CAGTTATGAA CTGTTAAAAG CTGGCTTAGA ACACAGTATT AGCGATGATA AATGGCGTTA TCACACTTAT CCGATTAACC AAATGTATGG AGTCCATTCT GTAGTGGCTT CATTTCTGAT TAATCAACAT CAGGTTACCG ATGAAAGTGA TGCTAAAGCC TATATTAGCC GTTTGAACGC CATACCAACA CTACTGGCAC AATTAGAAAC CTCGTTAGAA ATTCGCGCTA AAAAACATAT CATTGCACCA AAATTTGTAT TCCCATACGT AATTTCTGAT AGTAAAAACA TTATCACTGG CGCCCCATTT ACAGATACAG GAAAAGACAG TGCATTATGG GCTGATGCGA CACGTAAAGT AAATAAACTC GATATAACTA ATGACAGTAA AAAAGCATTA CTAGCTGAAG TTAAGCGAGC TCTACTGACT AAGGTAAAAC CTGCCTATGA GCAATTAATA ACCTATACCA AGTCACTTGA AGCTCGCGCC GATACTCGAG ATGGAGCTTG GAAACTGCCT GATGGAGAAG CGTTTTACAA TAACGCTCTA GCACGTACCA CCACAACCGA CATGACCGCA GACACGATAC ACGATCTTGG CTTATCAGAA GTTAAGCGAA TTCATGATGA AATGCGGATC ATTATGAAAA AGGTACACTT TGCCGGCAGC TTACAAGAGT TTTTTGTGTT CATGCGCGAT GATAAACAAT TTTATTACCC AGAAACTGAT GAAGGCAAAA CGGCATATCT GGCTCAAGCA AAATCACTGA TCGATACTAT GGAGTCTCGT TTAGACGAAG TGTTTACTAT TAAGCCTAAA GCCGAATTAG TAGTACGAAA GGTAGAAGCG TTTAGAGAAA AGTCTGCTGG TAAAGCATTT TACGACCAAC CTGCACCAGA TGGTTCTCGC CCAGGAAGCT ATTACGCTAA TTTATACAAA ATGGAAGCGA TGCCAAAGTA TCAAATGGAA GCACTTGCTT ACCATGAAGG CATTCCAGGG CATCACATGC AAATTGCTAT TGCACAAGAA CTGCAAGGTA TTCCAAAATT CCGTAAATTT GGTGGTTACA CGGCTTATAT TGAAGGTTGG GGACTTTATT CAGAATATTT CCCGAAAGAA ATGGGCTTAT ATGCCGACCC ATACTCTGAC TTTGGCCGTT TATCGATGGA GCTATGGCGC GCATGCCGTT TAGTGGTTGA TACGGGGATA CACGCAAAAA AATGGACTCG TGAACAGGCT ATTACCTATT ATGTTGAGAA TACTCCCAAC GCTGAATCTG ATGCGATAAA AATGGTTGAA CGCCATATTG TTATGCCATC ACAAGCGACA GCGTATAAAG TGGGAATGAT TAAAATACTA CAACTACGTG AGCAGGCTAA AAAGGCACTA GGAGCTAAGT TTGATATTCG CGAATTTCAT ACTGTAATTC TTAAAAATGG TCCATTGCCA TTAGACATAC TTGAAGAGCA AGTAAACAAG TGGATTAAAC AGGTTCAATC ACGGTAA
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Protein sequence | MSIKTKTTLV AVALSSLLSA SAIANLHNMP QLSQQESTAT SSQQTESEKA NALFEAIFME NVMANPVNQT YLGIKQDYGK WNDLSDAAAD ADLARSKQQL TRLTSLDANK LNEQAALSYE LLKAGLEHSI SDDKWRYHTY PINQMYGVHS VVASFLINQH QVTDESDAKA YISRLNAIPT LLAQLETSLE IRAKKHIIAP KFVFPYVISD SKNIITGAPF TDTGKDSALW ADATRKVNKL DITNDSKKAL LAEVKRALLT KVKPAYEQLI TYTKSLEARA DTRDGAWKLP DGEAFYNNAL ARTTTTDMTA DTIHDLGLSE VKRIHDEMRI IMKKVHFAGS LQEFFVFMRD DKQFYYPETD EGKTAYLAQA KSLIDTMESR LDEVFTIKPK AELVVRKVEA FREKSAGKAF YDQPAPDGSR PGSYYANLYK MEAMPKYQME ALAYHEGIPG HHMQIAIAQE LQGIPKFRKF GGYTAYIEGW GLYSEYFPKE MGLYADPYSD FGRLSMELWR ACRLVVDTGI HAKKWTREQA ITYYVENTPN AESDAIKMVE RHIVMPSQAT AYKVGMIKIL QLREQAKKAL GAKFDIREFH TVILKNGPLP LDILEEQVNK WIKQVQSR
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