Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2866 |
Symbol | |
ID | 4279771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 3447758 |
End bp | 3448897 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135684 |
Product | putative oxygen-independent coproporphyrinogen III oxidase |
Protein accession | YP_751544 |
Protein GI | 114564030 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00010545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGC AACTACCACC TCTTAGCTTG TATATCCATA TTCCTTGGTG CGTGCAAAAA TGCCCTTATT GCGATTTTAA CTCTCATGGC CAAAATGGTG AGTTACCACA GCAACAATAT GTCGATGCGT TACTGGACGA TTTAAAACAA GACTTGGCTT ATGTTCAAGG TAGAAAGGTG CATACCATCT TTATCGGCGG TGGCACGCCA TCGTTATTTG ACGCTAGCCA AATTCAACGC ATACTTGAAG GCGCACAAGC ATTAATCCCT TTTGAAGATA ATATTGAAAT CACCATGGAA GCCAATCCAG GTACATTAGA GCACGACGAC TTTAGTGCCT ATCGTGCTGC GGGTGTCACG CGCTTATCTA TTGGGGTGCA AAGTTTTTCA AAAGAAAAAC TTAATCTGCT AGGACGTATC CACAATGAAG ATGAAGCTAA AGTGGCGGCT GAAAAAGCCA AACAAGCAGA TTATTTAAGT TTTAATCTCG ACTTAATGCA CGGTTTACCA AACCAAAGCT TTGACGAAGC CATGCATGAT ATCGACACAG CAACAGCTTT AGCCCCACCG CATCTTTCTT GGTATCAACT CACCATTGAA CCCAACACCT TGTTTCATTC AAAACCGCCA CAATTACCAG ATGATGAGAA CCTGTGGCAA ATTTACGAGC AAGGTCAGCA GCGCTTAGCG GCATTAGGTT ATGAGCAATA CGAAATATCG GCCTATGCCA AACCGGGATA CCAATGTCGC CATAATCTTA ATTACTGGCA GTTTGGCGAC TACCTTGGCA TCGGTTGCGG TGCCCACGGT AAGATCACTC TCCCCGACTC AAATCGGATT GTGCGCACCG TAAAAATAAA ACACCCTAAG GGCTACCTCG CTGCGGATAA ATATACCTTT GAAACGACAG ATGTCGTTGA AGAAGACCGT CCATTAGAAT ACTTAATGAA CCGCCTAAGA TTGATGACTC CAATCCCTAA AACCGAATTT GAGCAACGTA CAGGTCAATC GGCCGAGGTG GTAAAGCTGG GAATGCAAAA ATCAATTGAA CGGGGATTAT TGACAGAAAC CAAAACACAT TGGCAATTGA CCTCTAAAGG CCACATGTTT GTAAATGATT TGCTGTCTCA ATTTATTTAA
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Protein sequence | MTLQLPPLSL YIHIPWCVQK CPYCDFNSHG QNGELPQQQY VDALLDDLKQ DLAYVQGRKV HTIFIGGGTP SLFDASQIQR ILEGAQALIP FEDNIEITME ANPGTLEHDD FSAYRAAGVT RLSIGVQSFS KEKLNLLGRI HNEDEAKVAA EKAKQADYLS FNLDLMHGLP NQSFDEAMHD IDTATALAPP HLSWYQLTIE PNTLFHSKPP QLPDDENLWQ IYEQGQQRLA ALGYEQYEIS AYAKPGYQCR HNLNYWQFGD YLGIGCGAHG KITLPDSNRI VRTVKIKHPK GYLAADKYTF ETTDVVEEDR PLEYLMNRLR LMTPIPKTEF EQRTGQSAEV VKLGMQKSIE RGLLTETKTH WQLTSKGHMF VNDLLSQFI
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