Gene Sfri_2862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2862 
Symbol 
ID4279767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp3445434 
End bp3445982 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content39% 
IMG OID638135680 
Productprotein of unknown function YGGT 
Protein accessionYP_751540 
Protein GI114564026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0177844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAA TGAGTTTTTT AGTCAACACT CTGTTTGACT TATACCTAAT GGTCGTCATT 
CTTCGTTTTT GGCTACAGCT TGCAAGAGCG GATTTTTATA ATCCATTTAG CCAATTTGTG 
GTTAAAGCGA CACAACCGAT TATCGCACCA ATGCGTCGAC TATTACCCTC TGTAGGACGT 
TTTGATACTT CATCAATGGT ACTGGCACTG ATTGTCGTGT TGGTCAAAAT GTTAGTGCTT 
ACTTTCATTG CAGGGGCAAC TGTAGACATT GTTACTTTAT TATTATTCTC AGTGATCTCA 
GTAGTAAAAC AAGCTGGCGT GTTACTTTTT TGGATGTTAC TTATCCGCGC AGTATTGAGC 
TGGTTTAACC AAGGTTATAA CCCAATTGTG ATGGTGATGA CCCAATTAAC AGAACCTATT 
TTAGCCCCAG TGCGCAAAGT ACTGCCTGCT ATTGGTGGCT TGGATTTATC TGTATTAGTG 
GTATTTATTG CGATGAATTT CATTAACATG TTGTGCGCGC AATATATTCC TTTTTGGTCA 
ATTATTTAG
 
Protein sequence
MNAMSFLVNT LFDLYLMVVI LRFWLQLARA DFYNPFSQFV VKATQPIIAP MRRLLPSVGR 
FDTSSMVLAL IVVLVKMLVL TFIAGATVDI VTLLLFSVIS VVKQAGVLLF WMLLIRAVLS 
WFNQGYNPIV MVMTQLTEPI LAPVRKVLPA IGGLDLSVLV VFIAMNFINM LCAQYIPFWS 
II