Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2847 |
Symbol | |
ID | 4279752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3431606 |
End bp | 3432826 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135665 |
Product | hypothetical protein |
Protein accession | YP_751525 |
Protein GI | 114564011 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.663115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGACT TTTATCAAAA TGGCATTGTC ACCACAATGC ATAATCTAAC CCGACGTAGC CATGAAGAGC TTGAGCAAGA TTTAATTAAG TTTTCAAAAA CGCGCCCGTT AGGATTAATT TTGCCATCTC TGTATTCAGA GCTAGAAGGC ACCGCACTTA AAGATATTGT GAGTAAATTA AAACAGGTGC CGTATTTATC AGAAATTGTG ATTGGATTAG ATAGAGCCGA TCTGCAACAG TACAAACACG CGCTAAGCTT TTTTGGTGAG TTACCGCAGC ATCATCGAAT ATTATGGAAT GACGGGCCAC GCTTACAAGC GCTGGATGCA AAACTGCAAG CGTTAGGCTT AGCGCCCAAA GAGCTGGGAA AAGGGCGAAA TGTCTGGTAT TGCATGGGTT ATGTTTTGGC TTCGGGTAAA ACAGAATCGG TTGCACTGCA TGATTGTGAC ATCGTGACCT ATGAAAAATC ATTACTCGCT AGACTGCTTT ATCCGGTCGC TAACCCGCAG TTTAACTATG AATTCAGTAA AGGTTATTAT GCACGTATTT CTAATGGACA AATTAATGGT CGAGTGTCAC GTCTATTAGT CACACCGTTG ATTAAAGCAC TTAAAAAAGT GGTCGGTTAC AACGAATATT TAGAATATAT GGACAGTTTT CGTTATCCAT TAGCGGGTGA GTTTTCATTT AGACGAGACG TGCTCAATGA CCTACGTATT CCAAGTGACT GGGGCTTAGA AATTGGTGTG CTGTCAGAAA TGCAGCGTAA CTATGCCCAT AATCGTATTT GTCAGGTTGA TATCGCCGAT AATTACGATC ATAAACATCA AGATTTATCA TTGGATAATG AAGACGCGGG TTTGTCTAAA ATGTCGATTG ATATCACTAA AGCCTTTTTC CGAAAGTTAG CCACTCAAGG ACATACTTTT AGCACTGAAT CGTTCCGAAC CCTTAAGGCA ACGTATTATC GTGTCGCCCT CGATTATGTC GAAACCTATC ATAATGATGC ATTAATGAAC GGCTTAACCA CCGATATACA TTTAGAAGAA AAAGCGGTTG AAATGTTTGC CCAAAATATT GTCACAGCAG GGCAACGCTT TTTAGATAAT CCAATGGAAA CCCCGTTTAT GCCAACATGG AGCCGAGTCG TGAGTGCCAT GCCAGACGTG CTCGAGCAGC TTAAAGCTGC TGTTGAAGCC GATAATGCTG AGTTTAGCTA A
|
Protein sequence | MADFYQNGIV TTMHNLTRRS HEELEQDLIK FSKTRPLGLI LPSLYSELEG TALKDIVSKL KQVPYLSEIV IGLDRADLQQ YKHALSFFGE LPQHHRILWN DGPRLQALDA KLQALGLAPK ELGKGRNVWY CMGYVLASGK TESVALHDCD IVTYEKSLLA RLLYPVANPQ FNYEFSKGYY ARISNGQING RVSRLLVTPL IKALKKVVGY NEYLEYMDSF RYPLAGEFSF RRDVLNDLRI PSDWGLEIGV LSEMQRNYAH NRICQVDIAD NYDHKHQDLS LDNEDAGLSK MSIDITKAFF RKLATQGHTF STESFRTLKA TYYRVALDYV ETYHNDALMN GLTTDIHLEE KAVEMFAQNI VTAGQRFLDN PMETPFMPTW SRVVSAMPDV LEQLKAAVEA DNAEFS
|
| |