Gene Sfri_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2847 
Symbol 
ID4279752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3431606 
End bp3432826 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content42% 
IMG OID638135665 
Producthypothetical protein 
Protein accessionYP_751525 
Protein GI114564011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.663115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACT TTTATCAAAA TGGCATTGTC ACCACAATGC ATAATCTAAC CCGACGTAGC 
CATGAAGAGC TTGAGCAAGA TTTAATTAAG TTTTCAAAAA CGCGCCCGTT AGGATTAATT
TTGCCATCTC TGTATTCAGA GCTAGAAGGC ACCGCACTTA AAGATATTGT GAGTAAATTA
AAACAGGTGC CGTATTTATC AGAAATTGTG ATTGGATTAG ATAGAGCCGA TCTGCAACAG
TACAAACACG CGCTAAGCTT TTTTGGTGAG TTACCGCAGC ATCATCGAAT ATTATGGAAT
GACGGGCCAC GCTTACAAGC GCTGGATGCA AAACTGCAAG CGTTAGGCTT AGCGCCCAAA
GAGCTGGGAA AAGGGCGAAA TGTCTGGTAT TGCATGGGTT ATGTTTTGGC TTCGGGTAAA
ACAGAATCGG TTGCACTGCA TGATTGTGAC ATCGTGACCT ATGAAAAATC ATTACTCGCT
AGACTGCTTT ATCCGGTCGC TAACCCGCAG TTTAACTATG AATTCAGTAA AGGTTATTAT
GCACGTATTT CTAATGGACA AATTAATGGT CGAGTGTCAC GTCTATTAGT CACACCGTTG
ATTAAAGCAC TTAAAAAAGT GGTCGGTTAC AACGAATATT TAGAATATAT GGACAGTTTT
CGTTATCCAT TAGCGGGTGA GTTTTCATTT AGACGAGACG TGCTCAATGA CCTACGTATT
CCAAGTGACT GGGGCTTAGA AATTGGTGTG CTGTCAGAAA TGCAGCGTAA CTATGCCCAT
AATCGTATTT GTCAGGTTGA TATCGCCGAT AATTACGATC ATAAACATCA AGATTTATCA
TTGGATAATG AAGACGCGGG TTTGTCTAAA ATGTCGATTG ATATCACTAA AGCCTTTTTC
CGAAAGTTAG CCACTCAAGG ACATACTTTT AGCACTGAAT CGTTCCGAAC CCTTAAGGCA
ACGTATTATC GTGTCGCCCT CGATTATGTC GAAACCTATC ATAATGATGC ATTAATGAAC
GGCTTAACCA CCGATATACA TTTAGAAGAA AAAGCGGTTG AAATGTTTGC CCAAAATATT
GTCACAGCAG GGCAACGCTT TTTAGATAAT CCAATGGAAA CCCCGTTTAT GCCAACATGG
AGCCGAGTCG TGAGTGCCAT GCCAGACGTG CTCGAGCAGC TTAAAGCTGC TGTTGAAGCC
GATAATGCTG AGTTTAGCTA A
 
Protein sequence
MADFYQNGIV TTMHNLTRRS HEELEQDLIK FSKTRPLGLI LPSLYSELEG TALKDIVSKL 
KQVPYLSEIV IGLDRADLQQ YKHALSFFGE LPQHHRILWN DGPRLQALDA KLQALGLAPK
ELGKGRNVWY CMGYVLASGK TESVALHDCD IVTYEKSLLA RLLYPVANPQ FNYEFSKGYY
ARISNGQING RVSRLLVTPL IKALKKVVGY NEYLEYMDSF RYPLAGEFSF RRDVLNDLRI
PSDWGLEIGV LSEMQRNYAH NRICQVDIAD NYDHKHQDLS LDNEDAGLSK MSIDITKAFF
RKLATQGHTF STESFRTLKA TYYRVALDYV ETYHNDALMN GLTTDIHLEE KAVEMFAQNI
VTAGQRFLDN PMETPFMPTW SRVVSAMPDV LEQLKAAVEA DNAEFS