Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2844 |
Symbol | |
ID | 4279749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3427855 |
End bp | 3428367 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638135662 |
Product | NusG antitermination factor |
Protein accession | YP_751522 |
Protein GI | 114564008 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.117724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTT GGTATTTACT GTATTGCAAA CCACGTCATG AAGTACGTGC ACAGCAAAAT TTGGCTTTAC AAGAAGTCGA GAGTTATTTA CCTATGATCA CCCAACAAAA AATGGTCCGC AATAAACCAC AAATGGTTAC GGCACCACTT TTCCCTAGCT ACCTGTTTAT CTATTTTGAT CCTCTCATCA CCAGCGTCAG CAAAATCCAC AATACACGTG GTGCGAATCG TATTGTTGGC TGCCGAGAAG ATATGACTCC CATTGACGAC AGAATTATTT CAGCGCTAAA AAGGCGTGTT CAAGGTTATG TACCAGAAGA GGTAAAACCG TTGGGCAAAG GCGATAAAGT CAAATTTGTC GACGGACCGT TTAAAGACCT TGAAGCAATA TTCGACGAGA ATAATCCTGA TAAGCGTTGC CATGTGTTAT TTAACATCAT GGGACAACAA AAACGGATTT TAGTCGAGTT GACGAATTTA CAAGCTGTAC CGAATAATGA CCAAACAACA TAA
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Protein sequence | MKSWYLLYCK PRHEVRAQQN LALQEVESYL PMITQQKMVR NKPQMVTAPL FPSYLFIYFD PLITSVSKIH NTRGANRIVG CREDMTPIDD RIISALKRRV QGYVPEEVKP LGKGDKVKFV DGPFKDLEAI FDENNPDKRC HVLFNIMGQQ KRILVELTNL QAVPNNDQTT
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