Gene Sfri_2844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2844 
Symbol 
ID4279749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3427855 
End bp3428367 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content40% 
IMG OID638135662 
ProductNusG antitermination factor 
Protein accessionYP_751522 
Protein GI114564008 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.117724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTT GGTATTTACT GTATTGCAAA CCACGTCATG AAGTACGTGC ACAGCAAAAT 
TTGGCTTTAC AAGAAGTCGA GAGTTATTTA CCTATGATCA CCCAACAAAA AATGGTCCGC
AATAAACCAC AAATGGTTAC GGCACCACTT TTCCCTAGCT ACCTGTTTAT CTATTTTGAT
CCTCTCATCA CCAGCGTCAG CAAAATCCAC AATACACGTG GTGCGAATCG TATTGTTGGC
TGCCGAGAAG ATATGACTCC CATTGACGAC AGAATTATTT CAGCGCTAAA AAGGCGTGTT
CAAGGTTATG TACCAGAAGA GGTAAAACCG TTGGGCAAAG GCGATAAAGT CAAATTTGTC
GACGGACCGT TTAAAGACCT TGAAGCAATA TTCGACGAGA ATAATCCTGA TAAGCGTTGC
CATGTGTTAT TTAACATCAT GGGACAACAA AAACGGATTT TAGTCGAGTT GACGAATTTA
CAAGCTGTAC CGAATAATGA CCAAACAACA TAA
 
Protein sequence
MKSWYLLYCK PRHEVRAQQN LALQEVESYL PMITQQKMVR NKPQMVTAPL FPSYLFIYFD 
PLITSVSKIH NTRGANRIVG CREDMTPIDD RIISALKRRV QGYVPEEVKP LGKGDKVKFV
DGPFKDLEAI FDENNPDKRC HVLFNIMGQQ KRILVELTNL QAVPNNDQTT