| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2828 |
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| Symbol | |
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| ID | 4279733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3409516 |
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| End bp | 3410391 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135646 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_751506 |
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| Protein GI | 114563992 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.39163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT TAATAACAGG CAAAAATGGC CAAGTAGGTC GTTGTTTAGT CGATCTACTC
GAAGCACAGA CGGGGCTAAC TTTTTTAGCA TTAGACCGTG AAGAGCTCGA TATCACCGAC
TCAATCCAAG TTGATAAAAT AGTTACCGAG TTTCAGCCTA ATATCATTAT TAATGCTGCC
GCTTATACCG CTGTAGATAA AGCTGAACAA GAAAGTGAAT TAGCCTTCGC TATCAACAGA
TACGGACCAC AAAATCTTGC GTATGCGGCA AACAAAATAA ATGCCGCAAT CCTTCATATT
TCGACCGATT ATGTCTTCGA TGGCAATAGT GCTGAGAGCT ATACTGAGTC AGATGTGACA
GCCCCTCAGG GTGAGTATGG TCGAAGTAAG TTAGCAGGTG AACACGCGGT TGCTCAGGCA
TGCCCTAAAC ATATTATATT AAGAACAGCA TGGGTCTTTG GTGAGCGCGG TAATAACTTC
GTTAAAACCA TGCTGCGCCT TGCTAAAACG AGAGAGTCTT TAGGCGTTGT CGGTGATCAG
TTTGGTGGCC CTACTTATGC GGGTGATATA GCAAAGGCCA TACTCACAAT CTCAAAACAG
GTAGTGCGAG AAAGTAAAGC TTATGGTATT TATCATTTCT CTGGTTTTCC CCATGTAAGT
TGGTATATTT TTGCTAAAAA AATATTTGAA ATAGCACTAG AACAAGACTT ACATGTCCAG
CCAATTCAAG TTAATCCAAT AACAACACTA GACTATCCAA CTCCAGCGAA ACGTCCTGCA
AACTCACGTT TAAATTGCGA CAAGATCCAT AATGCATTTG GTATTGAACA GAGCGACTGG
CAAGCAGCGT TAGTACGAAT TAAAGAGTAT TCATAA
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| Protein sequence | MKILITGKNG QVGRCLVDLL EAQTGLTFLA LDREELDITD SIQVDKIVTE FQPNIIINAA
AYTAVDKAEQ ESELAFAINR YGPQNLAYAA NKINAAILHI STDYVFDGNS AESYTESDVT
APQGEYGRSK LAGEHAVAQA CPKHIILRTA WVFGERGNNF VKTMLRLAKT RESLGVVGDQ
FGGPTYAGDI AKAILTISKQ VVRESKAYGI YHFSGFPHVS WYIFAKKIFE IALEQDLHVQ
PIQVNPITTL DYPTPAKRPA NSRLNCDKIH NAFGIEQSDW QAALVRIKEY S
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