Gene Sfri_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2824 
Symbol 
ID4279729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3405113 
End bp3406186 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content37% 
IMG OID638135642 
Productundecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 
Protein accessionYP_751502 
Protein GI114563988 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATT TAGTTCCGTT TATAACTGCT TTTTTGTTAT GTTTTGCTGC TATTTTAGTG 
TTTAAGCCTA TAGCAGCAAA GGTTGGTTTG TTAGATTTGC CAAATGAGCG TAAGTGTCAT 
GATGGTGCTA TACCTCTTAT TGGTGGTATA GCTATTTTCT CTAGTGTGTT ATTTGCCTCC 
AGCCTGTTTA TTCAAAACAG TCAAACCCTT AATTTATATC TTATTTCATC TTCGCTGATA 
CTTTTCATTG GGGTTTTAGA CGATAGATAT GATCTCTCTG TACGTTTACG ACTTGTCGCT 
CAAGTCATCA CTGCATCAAT TCTGATTTTT GGTGCAGGTT TTTACTTAAC AACACTTGGT 
AATATCTTTT ACTTTTTTGA GTTTAAACTG GGTTATATTG GTGTTTTAGT TACTGTTATT 
GCCGTGATTG GCTCGATTAA TGCTTTTAAT ATGGTTGATG GCATAGATGG GCTTGCGGGG 
ATGCTGAGTC TTGTCACTTT TACATCTTTA TCAGTACTAT TTTATCGAGC TGGCAATGAT 
TGGTTTTTAC TTCCTTTACT ATTTGATGCT GCAATTCTCG CTTATTTATT TTTTAATCTT 
CGTTGGCCTT TTGTTTCTGT ACAAAAAATA TTTATGGGTG ATGCGGGTAG CATGCTAATA 
GGGTTAACTG TTGTGTGGTT GTTAGTCTTA GGGACTCAAT CGTACAATGT CCATCTTGGC 
GGGAGATCGA GTAACATTGT TTTCTCTCCT GTGACAGCTT TGTACCTTAT CGCGATACCA 
TTAATGGATA TGACAGCCAT CATGTACAGA AGGATCCGAA AAGGATTCTC ACCTTTTAAG 
CCTGATCGTG ATCATCTGCA TCATATCTTT GAACGAGCTG GTTACAATCG TAAACAGACG 
CTTGTTAGAA TTACTCTGTT GTCTTTATTA TTAGCATTAT GTGGTATGGC TGGTGAGTTT 
TATCAGGTTC CCGAGTGGGT AATGTTTAGC TTATTTATTG TGTTATTTGT CTCTTATAAC 
TGGGCTCTCG CTCACGTTTG GCAAATTATT ACTTGGTTAA AGCGTAGCGA CTAA
 
Protein sequence
MDYLVPFITA FLLCFAAILV FKPIAAKVGL LDLPNERKCH DGAIPLIGGI AIFSSVLFAS 
SLFIQNSQTL NLYLISSSLI LFIGVLDDRY DLSVRLRLVA QVITASILIF GAGFYLTTLG 
NIFYFFEFKL GYIGVLVTVI AVIGSINAFN MVDGIDGLAG MLSLVTFTSL SVLFYRAGND 
WFLLPLLFDA AILAYLFFNL RWPFVSVQKI FMGDAGSMLI GLTVVWLLVL GTQSYNVHLG 
GRSSNIVFSP VTALYLIAIP LMDMTAIMYR RIRKGFSPFK PDRDHLHHIF ERAGYNRKQT 
LVRITLLSLL LALCGMAGEF YQVPEWVMFS LFIVLFVSYN WALAHVWQII TWLKRSD