Gene Sfri_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2822 
Symbol 
ID4279727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3402428 
End bp3403780 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content44% 
IMG OID638135640 
Productphosphoglucosamine mutase 
Protein accessionYP_751500 
Protein GI114563986 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTA AGTATTTTGG CACCGATGGT GTTCGTGGAA GGGTGGGGAC GTTTCCTATT 
ACGCCTGATT TTGCCATGAA GTTAGGTTGG GCTGCGGGCA AAGTATTAGC CTCAACCGGT
ACTCAAGAAG TATTGATTGG TAAAGATACT CGTAGCAGCG GTTATATGCT CGAATCAGCT
ATTGAAGCAG GTTTATCTGC TGCGGGTGTG AACGTAGCAT TAATTGGCCC TATGCCAACG
CCAGCTGTGG CGTATTTAGC CTCTACATTC CGTGCCGATG CTGGTGTAGT GATTAGTGCG
TCACATAATC CTTTTTATGA TAATGGTATT AAGTTTTTCT CGAATTCGGG CACCAAGCTT
AATGATCAGC AAGAGCTTGA AATTGAAGCT TTACTCGACC AAGCCTTGAA TCACAATGCG
ATGGAATGTG TTTCATCTGA ATTGTTAGGT AAAGTCCGTC GTATTACTGA TGCTGCGGGC
CGTTACATTG AGTTTTGCAA AGGCGTATTT GCTAAAGATT TAACCTTAGC TGGCCTTAAA
ATTGTCGTCG ATAGTGCTAA CGGTGCGGCG TATCATATTG CGCCCAATGT ATATCGTGAG
TTAGGTGCTG AGGTGATTAG CATTAATGAT AAGCCTAATG GCACTAATAT TAATGATCAT
TGCGGTGCGA CCCATTTAGA CAGTTTGCAA ACAGCAGTTA TGGTGCATGA AGCTGATTTA
GGCATTGCGA TGGACGGTGA CGCTGACCGG GTGATGTTTG TTGACCATAA TGGCCATGTA
GTGGACGGCG ATCAAATTTT GTATATTTTA GCTAAGTCGG CCAAACAGCA AGGCACAATG
ACAGGCGGTG TCGTTGGCAC ATTAATGTCT AACCTTGGTC TTGAGATTGC ATTAAAAGAA
ATGGATATTC CGTTTAAACG CGCCAAAGTG GGCGACCGTT ATGTGGTTGA ACAATTAAAA
CAGACTGGAT GGCGCATAGG CGGCGAAGGT TCTGGTCACA TACTGCACCT TGACCATGCA
TCAACTGGTG ATGCTGTTGT AGCGTCTTTA TTAGTATTAC AAGCAGTATT ACAGTCTGGC
CAGTCATTAG CTGAGATAGT ATCGTGTATG AAAAAGTTAC CTCAAGTACT GCTCAATGTT
CGGCTAACCG CTAATAACGC TGATGAAATC TTAGCTTCTG CAGCAGTAAA ACAAGCTGTA
ATCGAAGCTG AAGCAGTACT TGCCGAAAAC GGCAGAGTAT TATTACGTAA GTCTGGCACC
GAACCCCTTA TCCGCGTAAT GGTTGAATCA ACTGATCCTG AAATGTCACA AGCACAAGCA
GAGCACATAG CTAAAGTAGT CACTAGTTTC TAG
 
Protein sequence
MSRKYFGTDG VRGRVGTFPI TPDFAMKLGW AAGKVLASTG TQEVLIGKDT RSSGYMLESA 
IEAGLSAAGV NVALIGPMPT PAVAYLASTF RADAGVVISA SHNPFYDNGI KFFSNSGTKL
NDQQELEIEA LLDQALNHNA MECVSSELLG KVRRITDAAG RYIEFCKGVF AKDLTLAGLK
IVVDSANGAA YHIAPNVYRE LGAEVISIND KPNGTNINDH CGATHLDSLQ TAVMVHEADL
GIAMDGDADR VMFVDHNGHV VDGDQILYIL AKSAKQQGTM TGGVVGTLMS NLGLEIALKE
MDIPFKRAKV GDRYVVEQLK QTGWRIGGEG SGHILHLDHA STGDAVVASL LVLQAVLQSG
QSLAEIVSCM KKLPQVLLNV RLTANNADEI LASAAVKQAV IEAEAVLAEN GRVLLRKSGT
EPLIRVMVES TDPEMSQAQA EHIAKVVTSF